Resource

Id Histone_ChIP-seq/ENCSR588FQIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR588FQI [biosample_summary="Homo sapiens uterus tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR588FQI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000995/
  • biosample_summary: Homo sapiens uterus tissue female adult (51 years)
  • date_created: 2019-01-28T12:34:59.770487+00:00
  • date_released: 2019-02-11
  • doi: 10.17989/ENCSR588FQI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR588FQI float

Histone_ChIP-seq_ENCSR588FQI
Histone_ChIP-seq ENCSR588FQI [biosample_summary="Homo sapiens uterus tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR588FQI [1.68, 3.41]
n
273,027
mean
2.34
sd
0.247

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2730270.01% 720
chr1 16683 0.01% 44
chr2 17576 0.01% 49
chr3 12352 0.01% 38
chr4 17719 0.01% 47
chr5 19999 0.01% 49
chr6 16041 0.01% 47
chr7 10736 0.01% 29
chr8 15844 0.01% 42
chr9 9560 0.01% 26
chr10 11486 0.01% 34
chr11 10376 0.01% 28
chr12 13606 0.01% 34
chr13 6294 0.01% 19
chr14 7236 0.01% 21
chr15 3836 <0.01% 11
chr16 3322 <0.01% 8
chr17 3784 <0.01% 9
chr18 5442 0.01% 17
chr19 48001 0.08% 100
chr20 3600 0.01% 11
chr21 4232 0.01% 11
chr22 1989 <0.01% 5
chrX 13313 0.01% 41
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 720 225 1393 379.2 337
global segment-length histogram

Files

Filename Size md5
ENCFF145IUC.bed.gz 13.7 KB 4d5cbc718c338be3aea40373a74d1403
ENCFF145IUC.tabix.bed.gz 7.55 KB de3ef90eddcd83b68a5d79497280a3a5
ENCFF145IUC.tabix.bed.gz.tbi 11.95 KB 7dd84d4b036e354d4b15a4e9a422f37e
genomic_resource.yaml 1.71 KB 282f65f0a4e7628a9209a17d9930e22b
statistics/