Resource

Id Histone_ChIP-seq/ENCSR587FCMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR587FCM [biosample_summary="Homo sapiens SU-DHL-6" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR587FCM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002357/
  • biosample_summary: Homo sapiens SU-DHL-6
  • date_created: 2014-02-20T05:42:56.361052+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR587FCM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR587FCM float

Histone_ChIP-seq_ENCSR587FCM
Histone_ChIP-seq ENCSR587FCM [biosample_summary="Homo sapiens SU-DHL-6" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR587FCM [1.44, 8.04]
n
16,658,831
mean
3.45
sd
0.787

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 166588310.52% 21787
chr1 1145022 0.46% 1541
chr2 1104066 0.46% 1454
chr3 1024429 0.52% 1410
chr4 737452 0.39% 1001
chr5 895251 0.49% 1271
chr6 986107 0.58% 1294
chr7 1468635 0.92% 1892
chr8 1136386 0.78% 1327
chr9 520292 0.38% 715
chr10 580845 0.43% 744
chr11 583846 0.43% 768
chr12 793045 0.60% 1011
chr13 697014 0.61% 1035
chr14 653928 0.61% 943
chr15 337748 0.33% 446
chr16 494035 0.55% 608
chr17 396385 0.48% 450
chr18 534106 0.66% 795
chr19 1644237 2.81% 1808
chr20 251091 0.39% 340
chr21 446621 0.96% 626
chr22 188417 0.37% 249
chrX 39873 0.03% 59
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 21787 218 12060 764.62 604
global segment-length histogram

Files

Filename Size md5
ENCFF467GHW.bed.gz 474.19 KB 883e1fbe069bae198e9a9604644c11d9
ENCFF467GHW.tabix.bed.gz 229.4 KB d1f758ef4501e74843b4c23bb801a419
ENCFF467GHW.tabix.bed.gz.tbi 123.89 KB c316a87ec2afb6cdb8bfe17ffa3eb2e5
genomic_resource.yaml 2.11 KB ef7c9ed028e7528d0e7b6fb7c39428ce
statistics/