Resource

Id Histone_ChIP-seq/ENCSR586DVDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR586DVD [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR586DVD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (51 years)
  • date_created: 2017-12-06T21:11:18.995009+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR586DVD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR586DVD float

Histone_ChIP-seq_ENCSR586DVD
Histone_ChIP-seq ENCSR586DVD [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR586DVD [1.62, 6.43]
n
5,191,209
mean
3.36
sd
0.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 51912090.16% 5573
chr1 398992 0.16% 428
chr2 511260 0.21% 473
chr3 187231 0.09% 209
chr4 224310 0.12% 250
chr5 340516 0.19% 320
chr6 393833 0.23% 422
chr7 364627 0.23% 327
chr8 207859 0.14% 232
chr9 210413 0.15% 223
chr10 270883 0.20% 262
chr11 165935 0.12% 180
chr12 243449 0.18% 280
chr13 146433 0.13% 135
chr14 149129 0.14% 159
chr15 152539 0.15% 154
chr16 127214 0.14% 153
chr17 345268 0.41% 347
chr18 69406 0.09% 68
chr19 278537 0.48% 338
chr20 141121 0.22% 168
chr21 44180 0.09% 48
chr22 53311 0.10% 69
chrX 164763 0.11% 328
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 5573 235 9636 931.49 667
global segment-length histogram

Files

Filename Size md5
ENCFF607NRZ.bed.gz 106.45 KB fe40b71b6523520adf7ab51d0438194e
ENCFF607NRZ.tabix.bed.gz 56.27 KB aed55deb587d7bcf3aeb4b74ea2cc9dc
ENCFF607NRZ.tabix.bed.gz.tbi 31.59 KB f5b0a06f37d6a74cdffc0ce06e0b50ef
genomic_resource.yaml 1.73 KB 912af4f4e50ba3df73879129e97020cb
statistics/