Resource

Id Histone_ChIP-seq/ENCSR585GLZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR585GLZ [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR585GLZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003346/
  • biosample_summary: Homo sapiens mucosa of rectum tissue female adult (61 years)
  • date_created: 2015-09-15T19:52:29.821541+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR585GLZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR585GLZ float

Histone_ChIP-seq_ENCSR585GLZ
Histone_ChIP-seq ENCSR585GLZ [biosample_summary="Homo sapiens mucosa of rectum tissue female adult (61 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR585GLZ [2.15, 73]
n
46,116,842
mean
16.1
sd
11.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 461168421.43% 45307
chr1 4963103 1.99% 4807
chr2 3139854 1.30% 3098
chr3 2454948 1.24% 2392
chr4 1665357 0.88% 1603
chr5 2070662 1.14% 1930
chr6 2525525 1.48% 2433
chr7 2143352 1.35% 2107
chr8 1556953 1.07% 1588
chr9 1988091 1.44% 1982
chr10 2021220 1.51% 2045
chr11 2654322 1.96% 2516
chr12 2314994 1.74% 2215
chr13 855930 0.75% 797
chr14 1621793 1.52% 1574
chr15 1562074 1.53% 1543
chr16 1960086 2.17% 1986
chr17 3089230 3.71% 2982
chr18 717870 0.89% 763
chr19 2776236 4.74% 2754
chr20 1285964 2.00% 1322
chr21 535481 1.15% 564
chr22 1288750 2.54% 1282
chrX 925047 0.59% 1024
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45307 195 19607 1017.87 708
global segment-length histogram

Files

Filename Size md5
ENCFF116SSO.bed.gz 1.09 MB 24f7c242ce7d3ba0653f90bd7d9b30e6
ENCFF116SSO.tabix.bed.gz 493.82 KB 0241a227ee473e237793d7128e5561a4
ENCFF116SSO.tabix.bed.gz.tbi 179.87 KB 78eda8b4bad7c770b786c4d26fd9ee3f
genomic_resource.yaml 2.01 KB d36c71c52542fa7b00a871232fb45096
statistics/