Resource

Id Histone_ChIP-seq/ENCSR581YZLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR581YZL [biosample_summary="Homo sapiens iPS-15b" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR581YZL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007102/
  • biosample_summary: Homo sapiens iPS-15b
  • date_created: 2015-09-15T19:51:30.139573+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR581YZL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR581YZL float

Histone_ChIP-seq_ENCSR581YZL
Histone_ChIP-seq ENCSR581YZL [biosample_summary="Homo sapiens iPS-15b" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR581YZL [1.97, 85.9]
n
46,844,157
mean
14.8
sd
11.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 468441571.46% 51188
chr1 4628714 1.86% 5181
chr1_KI270713v1_random 2138 5.25% 3
chr2 3560672 1.47% 3770
chr3 2256003 1.14% 2443
chr4 2096304 1.10% 1991
chr5 2594705 1.43% 2574
chr6 2896945 1.70% 2894
chr7 2212626 1.39% 2132
chr8 2119313 1.46% 2345
chr9 2003821 1.45% 2270
chr9_KI270718v1_random 620 1.63% 1
chr10 2550543 1.91% 2611
chr11 2666646 1.97% 3125
chr12 2558326 1.92% 2731
chr13 1112475 0.97% 1163
chr14 1501571 1.40% 1629
chr15 1609296 1.58% 1733
chr16 1232373 1.36% 1488
chr17 2399359 2.88% 2757
chr18 1009269 1.26% 1075
chr19 1442330 2.46% 2097
chr20 1454734 2.26% 1865
chr21 349366 0.75% 389
chr22 1215827 2.39% 1362
chr22_KI270733v1_random 217 0.12% 1
chrUn_KI270752v1 411 1.48% 1
chrX 1369553 0.88% 1557
3339 contigs with no values (186018184 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51188 175 44683 915.14 484
global segment-length histogram

Files

Filename Size md5
ENCFF815LHN.bed.gz 1.03 MB 417bd21a1ee641f87bea87d7b3f7cb2e
ENCFF815LHN.tabix.bed.gz 512.53 KB c17d85c0de194e346953557eb8cb60e7
ENCFF815LHN.tabix.bed.gz.tbi 141.45 KB 0c4eb5962bde73b28045fd0195c727d9
genomic_resource.yaml 1.88 KB 13229faed25e443dc4dd1a1dbecd6729
statistics/