Histone_ChIP-seq_ENCSR580LZO
Histone_ChIP-seq ENCSR580LZO [biosample_summary="Homo sapiens IMR-90" and target="H3K9me1"]
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| Id: | Histone_ChIP-seq/ENCSR580LZO |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR580LZO [biosamplesummary="Homo sapiens IMR-90" and target="H3K9me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN638EBB|/analyses/ENCAN638EBB/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN638EBB|/analyses/ENCAN638EBB/} has in progress subobject document {281dc686-70d7-484a-a9b3-afbbefabc85a|/documents/281dc686-70d7-484a-a9b3-afbbefabc85a/} audit_not_compliant: Processed alignments file {ENCFF944RPR|/files/ENCFF944RPR/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 23662900 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF936ASR|/files/ENCFF936ASR/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 24080132 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR580LZO | float |
Histone_ChIP-seq_ENCSR580LZO |
Histone_ChIP-seq ENCSR580LZO [biosample_summary="Homo sapiens IMR-90" and target="H3K9me1"]
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[1.58, 18.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF262YTC.bed.gz | 2.89 MB | 94e801e7362b39123ce80479c0db488f |
| ENCFF262YTC.bed.gz.dvc | 101.0 B | 412f68fee17543ab1947dcdb81b039a2 |
| ENCFF262YTC.tabix.bed.gz | 1.28 MB | f79561b02565ecf803e08abacdbe7d44 |
| ENCFF262YTC.tabix.bed.gz.dvc | 107.0 B | a3ebcf3adeb3e4fb66d3fb3b1694d72e |
| ENCFF262YTC.tabix.bed.gz.tbi | 325.08 KB | 7a2651de28311e1fa565ee65c35d934a |
| ENCFF262YTC.tabix.bed.gz.tbi.dvc | 110.0 B | 6614fa7630b42f1c5f7b32ef1c75dfb3 |
| genomic_resource.yaml | 2.61 KB | 8b6896996a49a67fb59053117bc21ba1 |
| genomic_resource_original.yaml | 2.5 KB | 22a61555c004c497ec771baafe819d31 |
| statistics/ |