Resource

Id Histone_ChIP-seq/ENCSR579YLOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR579YLO [biosample_summary="Homo sapiens fibroblast of breast female adult (17 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR579YLO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0003079/
  • biosample_summary: Homo sapiens fibroblast of breast female adult (17 years)
  • date_created: 2015-09-15T20:26:33.407110+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR579YLO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (17 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR579YLO float

Histone_ChIP-seq_ENCSR579YLO
Histone_ChIP-seq ENCSR579YLO [biosample_summary="Homo sapiens fibroblast of breast female adult (17 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR579YLO [1.2, 48.1]
n
38,803,966
mean
7.9
sd
4.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 388039661.21% 44772
chr1 3804135 1.53% 4340
chr2 3090217 1.28% 3594
chr3 2662552 1.34% 3053
chr4 1692488 0.89% 2049
chr5 2364908 1.30% 2565
chr6 2434128 1.43% 2782
chr7 1973921 1.24% 2208
chr8 1752474 1.21% 2104
chr9 1744545 1.26% 2036
chr10 1901883 1.42% 2176
chr11 2250717 1.67% 2473
chr12 2221239 1.67% 2406
chr13 792641 0.69% 977
chr14 1255743 1.17% 1442
chr15 1477328 1.45% 1638
chr16 1003480 1.11% 1295
chr17 1824882 2.19% 2052
chr18 761238 0.95% 948
chr19 1400017 2.39% 1622
chr20 807128 1.25% 945
chr21 412789 0.88% 528
chr22 658514 1.30% 791
chrX 516999 0.33% 748
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44772 190 23924 866.7 611
global segment-length histogram

Files

Filename Size md5
ENCFF922BTH.bed.gz 1.0 MB 8ec06a9cd2dbb7a6334d5edda814e90d
ENCFF922BTH.tabix.bed.gz 474.59 KB d5712d01a2a7cf08029098c4ada3248e
ENCFF922BTH.tabix.bed.gz.tbi 194.87 KB 8515de55c5b3cf768f15461599e28a13
genomic_resource.yaml 1.52 KB 22adc74f36a5b91dafb76b0a40ec63cb
statistics/