Resource

Id Histone_ChIP-seq/ENCSR578VIDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR578VID [biosample_summary="Homo sapiens psoas muscle tissue female adult (41 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR578VID
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008450/
  • biosample_summary: Homo sapiens psoas muscle tissue female adult (41 years)
  • date_created: 2022-05-11T01:54:25.745707+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR578VID
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR578VID float

Histone_ChIP-seq_ENCSR578VID
Histone_ChIP-seq ENCSR578VID [biosample_summary="Homo sapiens psoas muscle tissue female adult (41 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR578VID [1.62, 9.6]
n
29,628,611
mean
4.11
sd
1.15

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 296286110.92% 39745
chr1 1786744 0.72% 2479
chr2 2024313 0.84% 2952
chr3 1636354 0.83% 2375
chr4 1734048 0.91% 2527
chr5 1813507 1.00% 2578
chr6 1430660 0.84% 2147
chr7 1464463 0.92% 2086
chr8 1409516 0.97% 2005
chr9 1051228 0.76% 1352
chr10 1208475 0.90% 1680
chr11 1148897 0.85% 1663
chr12 1461266 1.10% 1868
chr13 680647 0.60% 1086
chr14 773336 0.72% 1130
chr15 759448 0.74% 1025
chr16 871583 0.96% 1061
chr17 525542 0.63% 699
chr18 586348 0.73% 870
chr19 3849532 6.57% 3005
chr20 473458 0.73% 704
chr21 362806 0.78% 521
chr22 245641 0.48% 350
chrX 2330799 1.49% 3582
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 39745 195 40802 745.47 572
global segment-length histogram

Files

Filename Size md5
ENCFF504XWC.bed.gz 767.41 KB 82e37448c24ba011fd2d404757b9bebe
ENCFF504XWC.tabix.bed.gz 397.95 KB 11fdafdcf391dc5368140d7d323bccec
ENCFF504XWC.tabix.bed.gz.tbi 210.83 KB 9ca300fed2975412dc1824efd73abcbc
genomic_resource.yaml 1.51 KB cbcd9f59f9f9fffa8c5009d96c44133e
statistics/