Resource

Id Histone_ChIP-seq/ENCSR570PYHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR570PYH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR570PYH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)
  • date_created: 2021-08-25T18:07:42.048027+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR570PYH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR570PYH float

Histone_ChIP-seq_ENCSR570PYH
Histone_ChIP-seq ENCSR570PYH [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR570PYH [1.79, 18.9]
n
42,987,719
mean
9.18
sd
3.36

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 429877191.34% 27606
chr1 4235341 1.70% 2667
chr2 2938977 1.21% 1899
chr3 2602294 1.31% 1551
chr4 1758462 0.92% 1072
chr5 2166779 1.19% 1298
chr6 2508413 1.47% 1584
chr7 2032071 1.28% 1357
chr8 1709963 1.18% 1102
chr9 1747233 1.26% 1144
chr10 1871576 1.40% 1214
chr11 2401227 1.78% 1474
chr12 2330158 1.75% 1400
chr13 964502 0.84% 607
chr14 1427885 1.33% 894
chr15 1356637 1.33% 899
chr16 1647961 1.82% 1096
chr17 2394653 2.88% 1580
chr18 790530 0.98% 534
chr19 2624982 4.48% 1772
chr20 1077083 1.67% 731
chr21 397521 0.85% 282
chr22 947081 1.86% 666
chrX 1018561 0.65% 765
chrY 37829 0.07% 18
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27606 235 15273 1557.19 1270
global segment-length histogram

Files

Filename Size md5
ENCFF648FWC.bed.gz 607.83 KB dfe6be0d08afe853fa25d3d6e16d99b2
ENCFF648FWC.tabix.bed.gz 295.32 KB 09f8de4ee93d946fd2a1e1b4f4b854a9
ENCFF648FWC.tabix.bed.gz.tbi 158.09 KB 107c152a3eb00325825f041890655317
genomic_resource.yaml 1.56 KB c29d748cb7dfcf5b716162cdfbd057e0
statistics/