Resource

Id Histone_ChIP-seq/ENCSR569AGQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR569AGQ [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR569AGQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001871/
  • biosample_summary: Homo sapiens temporal lobe tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:00.716434+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR569AGQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR569AGQ float

Histone_ChIP-seq_ENCSR569AGQ
Histone_ChIP-seq ENCSR569AGQ [biosample_summary="Homo sapiens temporal lobe tissue female adult (75 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR569AGQ [1.93, 15.5]
n
9,649,677
mean
5.37
sd
1.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 96496770.30% 20541
chr1 762703 0.31% 1558
chr2 689687 0.28% 1322
chr3 272570 0.14% 584
chr4 402722 0.21% 735
chr5 503147 0.28% 951
chr6 594864 0.35% 1117
chr7 553696 0.35% 1013
chr8 361639 0.25% 794
chr9 343230 0.25% 685
chr10 558998 0.42% 1131
chr11 360404 0.27% 819
chr12 449552 0.34% 904
chr13 188434 0.16% 381
chr14 340262 0.32% 698
chr15 264800 0.26% 565
chr16 336732 0.37% 798
chr17 580756 0.70% 1101
chr18 156196 0.19% 348
chr19 380483 0.65% 829
chr20 319145 0.50% 728
chr21 125869 0.27% 284
chr22 138695 0.27% 344
chrX 965093 0.62% 2852
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20541 160 6951 469.78 342
global segment-length histogram

Files

Filename Size md5
ENCFF998LIO.bed.gz 362.19 KB 9238a1e99e357eb7fc92be2549413e57
ENCFF998LIO.tabix.bed.gz 192.37 KB 3b5ab099a163e78657c04a0303e73463
ENCFF998LIO.tabix.bed.gz.tbi 100.58 KB 1ae22593f8fe54da061b491c7435acfe
genomic_resource.yaml 2.02 KB fec5b5ec27daa9abb0cebb0629fb6f91
statistics/