Resource

Id Histone_ChIP-seq/ENCSR568OLPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR568OLP [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR568OLP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_NTR_0000427/
  • biosample_summary: Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence
  • date_created: 2015-09-15T20:27:20.024721+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR568OLP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (17 weeks)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR568OLP float

Histone_ChIP-seq_ENCSR568OLP
Histone_ChIP-seq ENCSR568OLP [biosample_summary="Homo sapiens neurosphere female embryo (17 weeks) originated from ganglionic eminence" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR568OLP [1.27, 39.4]
n
141,959,069
mean
6.24
sd
3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1419590694.41% 182250
chr1 9494761 3.81% 12790
chr2 10444904 4.31% 14273
chr3 8295910 4.18% 11612
chr4 7817201 4.11% 10694
chr5 8374690 4.61% 10849
chr6 7614903 4.46% 10734
chr7 9177861 5.76% 10839
chr8 7361489 5.07% 9188
chr9 4974465 3.59% 6614
chr10 6100553 4.56% 8025
chr11 6311547 4.67% 7983
chr12 6530938 4.90% 8049
chr13 4202394 3.67% 5700
chr14 4665249 4.36% 6189
chr15 4101565 4.02% 5344
chr16 4126460 4.57% 4949
chr17 3180381 3.82% 4021
chr18 3139402 3.91% 4409
chr19 8701696 14.84% 6782
chr20 2522437 3.91% 3452
chr21 2267311 4.85% 2675
chr22 1506995 2.97% 1899
chrX 10879845 6.97% 14961
chrY 166112 0.29% 219
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 182250 170 123758 778.92 534
global segment-length histogram

Files

Filename Size md5
ENCFF492BKE.bed.gz 3.67 MB 9f0558fb30f4de96f8009fa15501d7d9
ENCFF492BKE.tabix.bed.gz 1.78 MB cbf68fa70c33f649f7948e1f11b26c14
ENCFF492BKE.tabix.bed.gz.tbi 508.68 KB 9d2517313f2f407619f115910fc377ab
genomic_resource.yaml 1.61 KB 53bef20e1fd5ade163d4198768fda553
statistics/