Resource

Id Histone_ChIP-seq/ENCSR567VABcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR567VAB [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR567VAB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-04-30T04:18:00.321482+00:00
  • date_released: 2022-02-05
  • doi: 10.17989/ENCSR567VAB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR567VAB float

Histone_ChIP-seq_ENCSR567VAB
Histone_ChIP-seq ENCSR567VAB [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR567VAB [1.66, 7.03]
n
2,655,179
mean
3.51
sd
0.632

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 26551790.08% 7643
chr1 156666 0.06% 450
chr2 159345 0.07% 443
chr3 78413 0.04% 236
chr4 125979 0.07% 343
chr5 122573 0.07% 319
chr6 234877 0.14% 605
chr7 148573 0.09% 364
chr8 69776 0.05% 198
chr9 52324 0.04% 152
chr10 120064 0.09% 343
chr11 61358 0.05% 184
chr12 92333 0.07% 257
chr13 52752 0.05% 156
chr14 83928 0.08% 216
chr15 81652 0.08% 237
chr16 50563 0.06% 158
chr17 117507 0.14% 303
chr18 38142 0.05% 107
chr19 47451 0.08% 164
chr20 36204 0.06% 108
chr21 30673 0.07% 87
chr22 11914 0.02% 46
chrX 682112 0.44% 2167
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7643 155 2159 347.4 291
global segment-length histogram

Files

Filename Size md5
ENCFF008NWY.bed.gz 126.6 KB aa8812834407a32b13f841f9c46fbca0
ENCFF008NWY.tabix.bed.gz 70.2 KB f31e4f6d558acc553866abfa07647d84
ENCFF008NWY.tabix.bed.gz.tbi 54.62 KB 2ad1ebef0e5e95c0db8dd673e91b029b
genomic_resource.yaml 2.1 KB 26f275d5165124f9ba848ba113edbb06
statistics/