| Id: | Histone_ChIP-seq/ENCSR566UMF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR566UMF [biosamplesummary="Homo sapiens PC-3" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN732OHD|/analyses/ENCAN732OHD/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN732OHD|/analyses/ENCAN732OHD/} has in progress subobject document {e29cc98e-842e-403a-a0f5-714686312f39|/documents/e29cc98e-842e-403a-a0f5-714686312f39/} audit_not_compliant: Processed alignments file {ENCFF579UIC|/files/ENCFF579UIC/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 34511362 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR566UMF | float |
Histone_ChIP-seq_ENCSR566UMF |
Histone_ChIP-seq ENCSR566UMF [biosample_summary="Homo sapiens PC-3" and target="H3K4me1"]
|
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[1.44, 16.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF248RSG.bed.gz | 3.65 MB | be09734214e5fb2cb8cd5c1fa279bded |
| ENCFF248RSG.bed.gz.dvc | 101.0 B | 97a94435b1e2c1fcc6603a98cdce2980 |
| ENCFF248RSG.tabix.bed.gz | 1.54 MB | 04d2afb1de84f6ded302fff310c0524f |
| ENCFF248RSG.tabix.bed.gz.dvc | 107.0 B | ec7aaafb034e27237bbc6139c18bff2c |
| ENCFF248RSG.tabix.bed.gz.tbi | 380.8 KB | 5ca47dfd9cc5b60254c8c24ba7e094c8 |
| ENCFF248RSG.tabix.bed.gz.tbi.dvc | 110.0 B | 6ed2ac16e4a784c26060519680a26db3 |
| genomic_resource.yaml | 2.09 KB | 3209f2c3acd9896417e67cf10747845e |
| genomic_resource_original.yaml | 1.99 KB | 452065cf6d942d63c6d64e715bbbbb9c |
| statistics/ |