type: position_score
table:
  filename: ENCFF248RSG.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR566UMF
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ChIP-seq ENCSR566UMF [TISSUE: Homo sapiens PC-3, TARGET: H3K4me1]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: pseudoreplicated peaks\n\n**audit\\_internal\\\
    _action**: Released analysis {ENCAN732OHD|/analyses/ENCAN732OHD/} has in progress\
    \ subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/}\n\
    \n**audit\\_internal\\_action**: Released analysis {ENCAN732OHD|/analyses/ENCAN732OHD/}\
    \ has in progress subobject document {e29cc98e-842e-403a-a0f5-714686312f39|/documents/e29cc98e-842e-403a-a0f5-714686312f39/}\n\
    \n**audit\\_not\\_compliant**: Processed alignments file {ENCFF579UIC|/files/ENCFF579UIC/}\
    \ processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 34511362 usable fragments.\
    \ The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting\
    \ H3K4me1-human and investigated as a broad histone mark is 20 million usable\
    \ fragments. The recommended value is > 45 million, but > 35 million is acceptable.\
    \ (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/})"
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR566UMF
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens PC-3
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0002074/
    perturbed: false
    doi: 10.17989/ENCSR566UMF
    date_created: '2014-02-20T05:43:24.048504+00:00'
    date_released: '2016-05-03'
    submitter_comment: ''
    target: H3K4me1
