Resource

Id Histone_ChIP-seq/ENCSR564WJAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR564WJA [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR564WJA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (59 years)
  • date_created: 2020-05-01T03:02:16.886279+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR564WJA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR564WJA float

Histone_ChIP-seq_ENCSR564WJA
Histone_ChIP-seq ENCSR564WJA [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR564WJA [1.68, 26]
n
37,687,292
mean
7.36
sd
3.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 376872921.17% 32859
chr1 3810285 1.53% 3299
chr2 2787485 1.15% 2401
chr3 2115415 1.07% 1911
chr4 1215118 0.64% 1073
chr5 1722421 0.95% 1470
chr6 2091841 1.22% 1745
chr7 1686550 1.06% 1483
chr8 1326067 0.91% 1204
chr9 1572851 1.14% 1431
chr10 1761108 1.32% 1521
chr11 2169518 1.61% 1774
chr12 2067444 1.55% 1750
chr13 736816 0.64% 655
chr14 1430591 1.34% 1248
chr15 1285243 1.26% 1109
chr16 1441790 1.60% 1314
chr17 2342973 2.81% 2019
chr18 579489 0.72% 518
chr19 2292111 3.91% 2006
chr20 1070214 1.66% 962
chr21 439536 0.94% 404
chr22 1022711 2.01% 830
chrX 719715 0.46% 732
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32859 215 21554 1146.94 869
global segment-length histogram

Files

Filename Size md5
ENCFF805FFP.bed.gz 724.22 KB 4fa14862a8b77e1b936a2a92e0023993
ENCFF805FFP.tabix.bed.gz 346.53 KB 7cffb861f3b11aa56d4dc8989c2af7c7
ENCFF805FFP.tabix.bed.gz.tbi 150.76 KB ba10d68460c769f6210747e3f81e40b9
genomic_resource.yaml 1.71 KB 87eb0262a8177900f9fc50a5897a1c07
statistics/