Resource

Id Histone_ChIP-seq/ENCSR564QBScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR564QBS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (40 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR564QBS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (40 years)
  • date_created: 2020-05-01T02:55:04.471712+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR564QBS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (40 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR564QBS float

Histone_ChIP-seq_ENCSR564QBS
Histone_ChIP-seq ENCSR564QBS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (40 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR564QBS [1.69, 6.3]
n
9,816,991
mean
3.16
sd
0.568

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 98169910.31% 20531
chr1 1035302 0.42% 2148
chr2 785063 0.32% 1645
chr3 654217 0.33% 1411
chr4 314932 0.17% 703
chr5 485802 0.27% 1051
chr6 424407 0.25% 959
chr7 349131 0.22% 778
chr8 374621 0.26% 796
chr9 491986 0.36% 982
chr10 594421 0.44% 1208
chr11 572576 0.42% 1176
chr12 521399 0.39% 1072
chr13 210825 0.18% 471
chr14 352666 0.33% 726
chr15 359915 0.35% 753
chr16 358782 0.40% 740
chr17 607016 0.73% 1216
chr18 121965 0.15% 291
chr19 469142 0.80% 899
chr20 301068 0.47% 646
chr21 84006 0.18% 196
chr22 337384 0.66% 639
chrX 10365 0.01% 25
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 20531 215 4569 478.15 398
global segment-length histogram

Files

Filename Size md5
ENCFF620PTB.bed.gz 371.75 KB 670140e9b7af0547cf4d5a83b3f5dc00
ENCFF620PTB.tabix.bed.gz 205.67 KB 8019526e4f4030dc3fa5140c626c5ce3
ENCFF620PTB.tabix.bed.gz.tbi 106.3 KB 0648ba288c5c5ee4b98f811c2aef7564
genomic_resource.yaml 1.74 KB 7113f35ef787718472e37a667336b094
statistics/