Histone_ChIP-seq_ENCSR562JTY
Histone_ChIP-seq ENCSR562JTY [biosample_summary="Homo sapiens NCI-H929" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR562JTY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR562JTY [biosamplesummary="Homo sapiens NCI-H929" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN728ERO|/analyses/ENCAN728ERO/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF997XOK|/files/ENCFF997XOK/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline has 30097369 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF479IOR|/files/ENCFF479IOR/} processed by ChIP-seq ENCODE4 v1.8.1 GRCh38 pipeline has 22890667 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR562JTY | float |
Histone_ChIP-seq_ENCSR562JTY |
Histone_ChIP-seq ENCSR562JTY [biosample_summary="Homo sapiens NCI-H929" and target="H3K36me3"]
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[1.46, 6.75] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF733GLI.bed.gz | 1.38 MB | 0621486b9b8c6239eae255935b07bac3 |
| ENCFF733GLI.bed.gz.dvc | 101.0 B | efab2da83348af9e1b9eb84d66b37300 |
| ENCFF733GLI.tabix.bed.gz | 670.93 KB | 14fa6f6cd9bb02d5112afdec45931ddd |
| ENCFF733GLI.tabix.bed.gz.dvc | 106.0 B | 695dfa035cfb2be0af8ed074e00a280b |
| ENCFF733GLI.tabix.bed.gz.tbi | 163.46 KB | 45d74f1bd18a7381e76c2763adf2dc49 |
| ENCFF733GLI.tabix.bed.gz.tbi.dvc | 110.0 B | 2cfbd811b760ac94ecc7008e629874f3 |
| genomic_resource.yaml | 2.4 KB | 71dfa55d94cbe9a0cf71abe0a885c5d0 |
| genomic_resource_original.yaml | 2.29 KB | ed43ec8b8033423524e5905c1f17fc28 |
| statistics/ |