Resource

Id Histone_ChIP-seq/ENCSR561MYMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR561MYM [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR561MYM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000473/
  • biosample_summary: Homo sapiens testis tissue male adult (37 years)
  • date_created: 2017-07-28T10:04:43.975710+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR561MYM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR561MYM float

Histone_ChIP-seq_ENCSR561MYM
Histone_ChIP-seq ENCSR561MYM [biosample_summary="Homo sapiens testis tissue male adult (37 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR561MYM [2.14, 5.2]
n
315,294
mean
3.24
sd
0.455

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3152940.01% 828
chr1 31032 0.01% 83
chr2 24030 0.01% 64
chr3 23284 0.01% 60
chr4 12311 0.01% 35
chr5 11927 0.01% 34
chr6 11902 0.01% 30
chr7 12246 0.01% 33
chr8 13801 0.01% 39
chr9 14430 0.01% 38
chr10 14415 0.01% 38
chr11 12150 0.01% 33
chr12 18614 0.01% 52
chr13 7727 0.01% 21
chr14 11128 0.01% 29
chr15 10009 0.01% 26
chr16 12236 0.01% 34
chr17 17426 0.02% 44
chr18 6868 0.01% 19
chr19 34189 0.06% 78
chr20 6421 0.01% 16
chr21 3485 0.01% 7
chr22 5663 0.01% 15
3344 contigs with no values (342345395 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 828 200 1160 380.79 353.5
global segment-length histogram

Files

Filename Size md5
ENCFF469ASG.bed.gz 16.14 KB f77419575f57ef01581a24d61b17b08c
ENCFF469ASG.tabix.bed.gz 8.76 KB c1e352bc42862c538e495d6ff52687fd
ENCFF469ASG.tabix.bed.gz.tbi 13.08 KB 2789f567ea7680a8e6f1759c7829ac39
genomic_resource.yaml 2.18 KB cdea2f632fa464cc5917ef18aed67517
statistics/