Resource

Id Histone_ChIP-seq/ENCSR543UBLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR543UBL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR543UBL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)
  • date_created: 2017-12-06T21:04:50.865109+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR543UBL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR543UBL float

Histone_ChIP-seq_ENCSR543UBL
Histone_ChIP-seq ENCSR543UBL [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (54 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR543UBL [1.78, 10.7]
n
12,287,968
mean
4.86
sd
1.47

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 122879680.38% 9741
chr1 1223848 0.49% 1039
chr2 890259 0.37% 610
chr3 432151 0.22% 351
chr4 409460 0.22% 331
chr5 621656 0.34% 461
chr6 802579 0.47% 643
chr7 693634 0.44% 483
chr8 460249 0.32% 366
chr9 553440 0.40% 413
chr10 575629 0.43% 439
chr11 565845 0.42% 466
chr12 569896 0.43% 466
chr13 283474 0.25% 212
chr14 370404 0.35% 303
chr15 328817 0.32% 265
chr16 453286 0.50% 379
chr17 877632 1.05% 666
chr18 175039 0.22% 152
chr19 1062330 1.81% 833
chr20 486523 0.75% 432
chr21 121397 0.26% 99
chr22 266688 0.52% 263
chrX 63732 0.04% 69
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9741 225 27082 1261.47 856
global segment-length histogram

Files

Filename Size md5
ENCFF978KLA.bed.gz 188.37 KB fb7313636f3a3e343af0d96482d6149b
ENCFF978KLA.tabix.bed.gz 98.62 KB a520b3a0dcbb5936cf565f943ef8fc05
ENCFF978KLA.tabix.bed.gz.tbi 52.28 KB 27a10543a82838758a702248e6f6af2d
genomic_resource.yaml 1.77 KB c1538ea955be48d555b39fee895b564e
statistics/