Resource

Id Histone_ChIP-seq/ENCSR542YRHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR542YRH [biosample_summary="Homo sapiens MM.1S" and target="H3K79me2"]
Description
Labels
  • accession: ENCSR542YRH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005724/
  • biosample_summary: Homo sapiens MM.1S
  • date_created: 2014-10-24T16:20:50.250203+00:00
  • date_released: 2016-10-07
  • doi: 10.17989/ENCSR542YRH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Cross-correlation metrics are too poor to permit further analysis.
  • target: H3K79me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR542YRH float

Histone_ChIP-seq_ENCSR542YRH

Histone_ChIP-seq ENCSR542YRH [biosample_summary="Homo sapiens MM.1S" and target="H3K79me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR542YRH [1.47, 24.8]
n
122,694,536
mean
6.3
sd
3.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1226945363.81% 80662
chr1 10913499 4.38% 7370
chr2 10425108 4.30% 6377
chr3 8223687 4.15% 5144
chr4 5653121 2.97% 3734
chr5 7039304 3.88% 4338
chr6 6371071 3.73% 4129
chr7 7917866 4.97% 4898
chr8 4743674 3.27% 3155
chr9 4613442 3.33% 3241
chr10 6155028 4.60% 4064
chr11 6167597 4.57% 4010
chr12 6088683 4.57% 4027
chr13 2371688 2.07% 1751
chr14 2515967 2.35% 1961
chr15 4595032 4.51% 3103
chr16 4444101 4.92% 3051
chr17 6364046 7.64% 4128
chr18 2597065 3.23% 1719
chr19 4348409 7.42% 2949
chr20 3693913 5.73% 2151
chr21 1485187 3.18% 960
chr22 3425839 6.74% 2278
chrX 2541209 1.63% 2124
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 80662 193 59757 1521.09 756
global segment-length histogram

Files

Filename Size md5
ENCFF411MKT.bed.gz 1.92 MB 181873a39ffc7588019fee4b43a79dba
ENCFF411MKT.tabix.bed.gz 858.57 KB c454f49cf10a35408f226ed118325083
ENCFF411MKT.tabix.bed.gz.tbi 115.82 KB eff018362a16ee6d1ab787a87a525a9a
genomic_resource.yaml 1.65 KB fe8f6189ee642c43cd047d2879ab3027
statistics/