Resource

Id Histone_ChIP-seq/ENCSR526PZMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR526PZM [biosample_summary="Homo sapiens SK-N-MC" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR526PZM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002860/
  • biosample_summary: Homo sapiens SK-N-MC
  • date_created: 2014-02-20T04:37:47.204695+00:00
  • date_released: 2017-01-05
  • doi: 10.17989/ENCSR526PZM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Cross-correlation metrics are too poor to permit further analysis.
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR526PZM float

Histone_ChIP-seq_ENCSR526PZM
Histone_ChIP-seq ENCSR526PZM [biosample_summary="Homo sapiens SK-N-MC" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR526PZM [1.58, 24.7]
n
121,380,750
mean
5.36
sd
2.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1213807503.77% 108415
chr1 13235949 5.32% 11389
chr2 10352318 4.27% 9389
chr3 6561107 3.31% 6179
chr4 5692031 2.99% 5195
chr5 6996681 3.85% 5997
chr6 6284507 3.68% 5781
chr7 5993477 3.76% 5595
chr8 7140900 4.92% 5604
chr9 5408389 3.91% 4665
chr10 1887529 1.41% 2283
chr11 6423993 4.76% 5627
chr12 7325150 5.50% 6465
chr13 3376300 2.95% 3113
chr14 4622621 4.32% 4236
chr15 4207831 4.13% 3782
chr16 2929946 3.24% 2705
chr17 5988427 7.19% 5373
chr18 1906016 2.37% 1826
chr19 5428630 9.26% 4443
chr20 3416769 5.30% 2847
chr21 1596820 3.42% 1431
chr22 2419804 4.76% 2083
chrX 2185555 1.40% 2407
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 108415 218 39938 1119.59 696
global segment-length histogram

Files

Filename Size md5
ENCFF423AWX.bed.gz 2.32 MB a8670550522555a2a0c2c6a10fd9010f
ENCFF423AWX.tabix.bed.gz 1.09 MB 12c08fbe66da1b3f03f441c961c5c9de
ENCFF423AWX.tabix.bed.gz.tbi 151.42 KB 69dfeb0edde44488c9cd2e25175477ad
genomic_resource.yaml 2.17 KB d9167f9655188bf0b88df71e25213a7d
statistics/