Resource

Id Histone_ChIP-seq/ENCSR525JJMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR525JJM [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR525JJM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)
  • date_created: 2018-04-26T17:36:46.367218+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR525JJM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR525JJM float

Histone_ChIP-seq_ENCSR525JJM
Histone_ChIP-seq ENCSR525JJM [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR525JJM [1.46, 21.5]
n
212,266,105
mean
6.06
sd
2.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2122661056.60% 142159
chr1 21007267 8.44% 13413
chr2 17299899 7.14% 11660
chr3 15012001 7.57% 10023
chr4 9170557 4.82% 6852
chr5 10856394 5.98% 7607
chr6 11326424 6.63% 8465
chr7 10533428 6.61% 7336
chr8 8820884 6.08% 6240
chr9 9880620 7.14% 6406
chr10 12126462 9.06% 7717
chr11 11261332 8.34% 7118
chr12 10660955 8.00% 7076
chr13 4969328 4.35% 3414
chr14 7314433 6.83% 4719
chr15 7654307 7.50% 5071
chr16 7064614 7.82% 4497
chr17 10357873 12.44% 6160
chr18 4009686 4.99% 3021
chr19 7139339 12.18% 4384
chr20 5996523 9.30% 3832
chr21 2297071 4.92% 1612
chr22 4819889 9.48% 2871
chrX 2624990 1.68% 2579
chrY 61829 0.11% 86
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 142159 230 66887 1493.16 1022
global segment-length histogram

Files

Filename Size md5
ENCFF150NIG.bed.gz 3.24 MB 740aa88f5584e3b113c7b765da6fbf9d
ENCFF150NIG.tabix.bed.gz 1.47 MB 84c7b9d90f77695e51ff1e85e69c968b
ENCFF150NIG.tabix.bed.gz.tbi 330.68 KB ee3f12a38d80afc53476d86980b70827
genomic_resource.yaml 1.55 KB e2f43abd8172727763d63c45809439ef
statistics/