Resource

Id Histone_ChIP-seq/ENCSR525HKYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR525HKY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR525HKY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (41 years)
  • date_created: 2021-04-30T04:18:06.862521+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR525HKY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR525HKY float

Histone_ChIP-seq_ENCSR525HKY
Histone_ChIP-seq ENCSR525HKY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR525HKY [1.51, 5.68]
n
1,293,642
mean
3.07
sd
0.568

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 12936420.04% 2290
chr1 54811 0.02% 102
chr2 43764 0.02% 91
chr3 42295 0.02% 87
chr4 70614 0.04% 131
chr5 70275 0.04% 137
chr6 37519 0.02% 76
chr7 54345 0.03% 106
chr8 52899 0.04% 94
chr9 39744 0.03% 71
chr10 24667 0.02% 51
chr11 34263 0.03% 68
chr12 67696 0.05% 117
chr13 45029 0.04% 99
chr14 32347 0.03% 69
chr15 31580 0.03% 59
chr16 49805 0.06% 81
chr17 22513 0.03% 35
chr18 10264 0.01% 23
chr19 373546 0.64% 535
chr20 7359 0.01% 15
chr21 75600 0.16% 134
chr22 29630 0.06% 59
chrX 23077 0.01% 50
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2290 205 2379 564.91 471
global segment-length histogram

Files

Filename Size md5
ENCFF866NSS.bed.gz 45.48 KB 7efc910b8fb7c26b18a47f4417be116f
ENCFF866NSS.tabix.bed.gz 24.0 KB 96ad8988b535a567abf7cb61e7911acc
ENCFF866NSS.tabix.bed.gz.tbi 21.32 KB 39ad48479475e908fd74bd9e43c77eab
genomic_resource.yaml 1.52 KB 5804d218f033562b702372defac7dc12
statistics/