Resource

Id Histone_ChIP-seq/ENCSR522MTScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR522MTS [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR522MTS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)
  • date_created: 2018-04-26T17:36:01.056244+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR522MTS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR522MTS float

Histone_ChIP-seq_ENCSR522MTS
Histone_ChIP-seq ENCSR522MTS [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR522MTS [1.47, 64.8]
n
142,099,524
mean
18.7
sd
15.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1420995244.42% 75795
chr1 14404787 5.79% 7476
chr2 10784389 4.45% 5871
chr3 9705303 4.89% 5129
chr4 5758918 3.03% 3278
chr5 6587940 3.63% 3799
chr6 7023817 4.11% 4160
chr7 6519402 4.09% 3603
chr8 5416281 3.73% 3131
chr9 6772712 4.89% 3546
chr10 8144514 6.09% 4251
chr11 7558779 5.60% 3757
chr12 7488182 5.62% 3845
chr13 3251663 2.84% 1800
chr14 4991142 4.66% 2502
chr15 5010116 4.91% 2731
chr16 4891298 5.41% 2597
chr17 7614677 9.15% 3787
chr18 2373700 2.95% 1437
chr19 5621170 9.59% 2615
chr20 4006255 6.22% 2032
chr21 1589793 3.40% 936
chr22 3473624 6.84% 1679
chrX 3053932 1.96% 1800
chrY 57130 0.10% 33
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 75795 225 185565 1874.79 1117
global segment-length histogram

Files

Filename Size md5
ENCFF443CJX.bed.gz 1.87 MB 6ecc8b70df0f625f400bdf697767768f
ENCFF443CJX.tabix.bed.gz 839.8 KB 3a9e6c6a1cd06894b03245f8461c9619
ENCFF443CJX.tabix.bed.gz.tbi 238.38 KB 9378cd1b96d7945194032228e4b0f0bd
genomic_resource.yaml 1.55 KB 808de3f711c7290c50d494634b532012
statistics/