Resource

Id Histone_ChIP-seq/ENCSR517NSQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR517NSQ [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR517NSQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (61 years)
  • date_created: 2021-04-30T04:18:18.885728+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR517NSQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR517NSQ float

Histone_ChIP-seq_ENCSR517NSQ
Histone_ChIP-seq ENCSR517NSQ [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR517NSQ [1.86, 47.6]
n
40,655,042
mean
8.75
sd
5.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 406550421.26% 36852
chr1 4186204 1.68% 3639
chr2 2909984 1.20% 2700
chr3 2759325 1.39% 2519
chr4 1605329 0.84% 1470
chr5 2107791 1.16% 1901
chr6 2242296 1.31% 2019
chr7 1816069 1.14% 1772
chr8 1657812 1.14% 1536
chr9 1784474 1.29% 1618
chr10 2214653 1.66% 1986
chr11 1975580 1.46% 1728
chr12 2222480 1.67% 1924
chr13 972758 0.85% 936
chr14 1250750 1.17% 1132
chr15 1443609 1.42% 1318
chr16 1381289 1.53% 1331
chr17 2229689 2.68% 1950
chr18 811676 1.01% 749
chr19 1799192 3.07% 1616
chr20 1150764 1.79% 1003
chr21 396133 0.85% 398
chr22 1042199 2.05% 881
chrX 672194 0.43% 707
chrY 22792 0.04% 19
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 36852 230 18506 1103.2 830
global segment-length histogram

Files

Filename Size md5
ENCFF336ETH.bed.gz 877.13 KB 0d52f49d9b159d9345083dce9cf499e5
ENCFF336ETH.tabix.bed.gz 401.19 KB 7c1fedc10b0ad18464d14cf87c15e7e1
ENCFF336ETH.tabix.bed.gz.tbi 169.65 KB e783c00111e61c9067f7a5f2cc3391df
genomic_resource.yaml 1.53 KB d131927515a66f968c91b762edb92a51
statistics/