Resource

Id Histone_ChIP-seq/ENCSR516LZKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR516LZK [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR516LZK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (61 years)
  • date_created: 2021-04-30T04:18:18.497137+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR516LZK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (61 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR516LZK float

Histone_ChIP-seq_ENCSR516LZK
Histone_ChIP-seq ENCSR516LZK [biosample_summary="Homo sapiens heart left ventricle tissue male adult (61 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR516LZK [2.13, 55.9]
n
33,614,075
mean
19.6
sd
9.46

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 336140751.04% 23568
chr1 3358528 1.35% 2397
chr2 2257959 0.93% 1528
chr3 1931664 0.97% 1311
chr4 1357704 0.71% 909
chr5 1626861 0.90% 1097
chr6 1941712 1.14% 1305
chr7 1640899 1.03% 1161
chr8 1267805 0.87% 883
chr9 1430866 1.03% 1033
chr10 1444689 1.08% 976
chr11 1814625 1.34% 1219
chr12 1752967 1.32% 1194
chr13 717306 0.63% 485
chr14 1062860 0.99% 727
chr15 1090628 1.07% 774
chr16 1324502 1.47% 968
chr17 1947949 2.34% 1378
chr18 600115 0.75% 402
chr19 2101623 3.59% 1626
chr20 852794 1.32% 601
chr21 305630 0.65% 225
chr22 767594 1.51% 556
chrX 979442 0.63% 788
chrY 37353 0.07% 25
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23568 195 13157 1426.26 1279
global segment-length histogram

Files

Filename Size md5
ENCFF166ZAS.bed.gz 618.68 KB f28fc7417396dee8aa6407f2e83402dc
ENCFF166ZAS.tabix.bed.gz 271.39 KB ed46b65a1711523f5583ab980b615e12
ENCFF166ZAS.tabix.bed.gz.tbi 151.39 KB bddf23c224261873d2c82450e1f79c1e
genomic_resource.yaml 1.53 KB b2cf367884aaf3c6ddcbde6916a23e5d
statistics/