Histone_ChIP-seq_ENCSR514DNQ
Histone_ChIP-seq ENCSR514DNQ [biosample_summary="Homo sapiens muscle of trunk tissue female embryo (115 days)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR514DNQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR514DNQ [biosamplesummary="Homo sapiens muscle of trunk tissue female embryo (115 days)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (115 days) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN461YPI|/analyses/ENCAN461YPI/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN461YPI|/analyses/ENCAN461YPI/} has in progress subobject document {fec6962d-41d9-4d37-8b78-16af81b1ab60|/documents/fec6962d-41d9-4d37-8b78-16af81b1ab60/} audit_not_compliant: Processed alignments file {ENCFF193NUF|/files/ENCFF193NUF/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 17287576 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR514DNQ | float |
Histone_ChIP-seq_ENCSR514DNQ |
Histone_ChIP-seq ENCSR514DNQ [biosample_summary="Homo sapiens muscle of trunk tissue female embryo (115 days)" and target="H3K4me1"]
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[1.76, 49.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF579DCG.bed.gz | 3.21 MB | 39203a923d50fb0806fd4a83b63c6622 |
| ENCFF579DCG.bed.gz.dvc | 101.0 B | c06232fd993ce877b0267604805766fb |
| ENCFF579DCG.tabix.bed.gz | 1.47 MB | c66493561e9289b9743f1cc3758c4163 |
| ENCFF579DCG.tabix.bed.gz.dvc | 107.0 B | f7e58ea2f87a89c8f71781907c95a31a |
| ENCFF579DCG.tabix.bed.gz.tbi | 325.14 KB | 519fac153edca9837b2f1d77fa2411c3 |
| ENCFF579DCG.tabix.bed.gz.tbi.dvc | 110.0 B | 684241dfebcef450d66cecaa22ff3321 |
| genomic_resource.yaml | 2.23 KB | dbe9812d7bbe426f51a2447ec8342d0d |
| genomic_resource_original.yaml | 2.08 KB | d279d8b40acdd71d70ba5caa9e440c4f |
| statistics/ |