Resource

Id Histone_ChIP-seq/ENCSR507SRDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR507SRD [biosample_summary="Homo sapiens trophoblast tissue female embryo (20 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR507SRD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000088/
  • biosample_summary: Homo sapiens trophoblast tissue female embryo (20 weeks)
  • date_created: 2017-03-22T16:17:01.952711+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR507SRD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (20 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR507SRD float

Histone_ChIP-seq_ENCSR507SRD
Histone_ChIP-seq ENCSR507SRD [biosample_summary="Homo sapiens trophoblast tissue female embryo (20 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR507SRD [1.46, 31.2]
n
70,948,591
mean
6.71
sd
3.47

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 709485912.21% 70120
chr1 7300723 2.93% 7028
chr1_KI270713v1_random 485 1.19% 1
chr2 6011209 2.48% 5843
chr3 5221983 2.63% 5094
chr4 3486820 1.83% 3676
chr5 4127110 2.27% 4166
chr6 4839645 2.83% 4833
chr7 3511902 2.20% 3615
chr8 3447425 2.38% 3338
chr9 3348517 2.42% 3179
chr10 3473761 2.60% 3364
chr11 3699563 2.74% 3532
chr12 3563986 2.67% 3517
chr13 2013546 1.76% 1992
chr14 2187933 2.04% 2090
chr15 2437838 2.39% 2399
chr16 1577777 1.75% 1619
chr17 2612858 3.14% 2632
chr17_GL000205v2_random 12576 6.78% 6
chr18 1508814 1.88% 1563
chr19 1814355 3.10% 1897
chr20 1695821 2.63% 1656
chr21 967932 2.07% 942
chr22 1256539 2.47% 1137
chrUn_GL000195v1 6443 3.52% 10
chrUn_GL000219v1 423 0.24% 1
chrX 822607 0.53% 990
3339 contigs with no values (185716070 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70120 225 13460 1011.82 747
global segment-length histogram

Files

Filename Size md5
ENCFF972AZZ.bed.gz 1.5 MB a477b4eba803c68d559fa5ad64f76387
ENCFF972AZZ.tabix.bed.gz 716.06 KB a0a607383f46475e13bb44281b438cc4
ENCFF972AZZ.tabix.bed.gz.tbi 232.24 KB e17d313a8b50a5b914f5b78d47ef44ca
genomic_resource.yaml 1.51 KB 71895849415f5b760482ae0b3aaeb934
statistics/