Resource

Id Histone_ChIP-seq/ENCSR505YFAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR505YFA [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR505YFA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (37 years)
  • date_created: 2018-04-26T17:30:53.747582+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR505YFA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR505YFA float

Histone_ChIP-seq_ENCSR505YFA
Histone_ChIP-seq ENCSR505YFA [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR505YFA [1.78, 65.3]
n
69,295,418
mean
11.9
sd
9.87

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 692954182.15% 50248
chr1 6993773 2.81% 4973
chr2 5016882 2.07% 3725
chr3 4226244 2.13% 3201
chr4 2247837 1.18% 1789
chr5 3122845 1.72% 2336
chr6 3640940 2.13% 2752
chr7 2996606 1.88% 2306
chr8 2518408 1.74% 1948
chr9 3005752 2.17% 2191
chr10 3435182 2.57% 2476
chr11 3765606 2.79% 2634
chr12 3595930 2.70% 2510
chr13 1446477 1.26% 1157
chr14 2268340 2.12% 1619
chr15 2472973 2.42% 1771
chr16 2917801 3.23% 2084
chr17 4450586 5.35% 2963
chr18 1170003 1.46% 917
chr19 3853767 6.57% 2497
chr20 2145400 3.33% 1507
chr21 811921 1.74% 639
chr22 1940488 3.82% 1301
chrX 1219999 0.78% 935
chrY 31658 0.06% 17
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50248 220 28124 1379.07 958
global segment-length histogram

Files

Filename Size md5
ENCFF381SFJ.bed.gz 1.23 MB 01f1318e4b2671a6ce198f31067d10a1
ENCFF381SFJ.tabix.bed.gz 556.11 KB 211d96041cf9d49c897e44fdc011a8b8
ENCFF381SFJ.tabix.bed.gz.tbi 197.68 KB 86c6f11c1b606419443a553775949fd0
genomic_resource.yaml 1.75 KB 357561ac5e21a2604b2355f8ab613276
statistics/