Resource

Id Histone_ChIP-seq/ENCSR500YBScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR500YBS [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR500YBS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (51 years)
  • date_created: 2017-12-06T20:58:39.399405+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR500YBS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR500YBS float

Histone_ChIP-seq_ENCSR500YBS
Histone_ChIP-seq ENCSR500YBS [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR500YBS [1.24, 43.8]
n
120,980,487
mean
7.5
sd
4.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1209804873.76% 76328
chr1 11429875 4.59% 7106
chr2 9259399 3.82% 5846
chr3 8003479 4.04% 5046
chr4 5385230 2.83% 3489
chr5 5820359 3.21% 3831
chr6 7064766 4.14% 4463
chr7 5214129 3.27% 3461
chr8 5446538 3.75% 3444
chr9 5734372 4.14% 3638
chr10 6477189 4.84% 3924
chr11 6551255 4.85% 4043
chr12 6101903 4.58% 3693
chr13 2845075 2.49% 1886
chr14 4426790 4.14% 2677
chr15 4261645 4.18% 2627
chr16 4431745 4.91% 2805
chr17 5957013 7.15% 3654
chr18 2514850 3.13% 1672
chr19 4125553 7.04% 2706
chr20 3563059 5.53% 2117
chr21 1379757 2.95% 874
chr22 3049650 6.00% 1796
chrM 6833 41.24% 5
chrX 1927963 1.24% 1524
chrY 2060 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76328 230 48000 1585.01 1052
global segment-length histogram

Files

Filename Size md5
ENCFF086VAY.bed.gz 1.87 MB bcf712050972c2619cc315e4b8263250
ENCFF086VAY.tabix.bed.gz 844.17 KB 7bd0803edd09dd0b7ddfd66dc849a20e
ENCFF086VAY.tabix.bed.gz.tbi 238.55 KB 82dbb11e61ff85e6383e0ddc568526dc
genomic_resource.yaml 1.51 KB 90a2206eaf9f27f59478396366cb509c
statistics/