Resource

Id Histone_ChIP-seq/ENCSR499RMZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR499RMZ [biosample_summary="Homo sapiens KMS-11" and target="H2AFZ"]
Description
Labels
  • accession: ENCSR499RMZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005694/
  • biosample_summary: Homo sapiens KMS-11
  • date_created: 2015-05-20T20:37:20.282404+00:00
  • date_released: 2016-11-01
  • doi: 10.17989/ENCSR499RMZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2AFZ

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR499RMZ float

Histone_ChIP-seq_ENCSR499RMZ
Histone_ChIP-seq ENCSR499RMZ [biosample_summary="Homo sapiens KMS-11" and target="H2AFZ"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR499RMZ [1.74, 20.8]
n
42,716,305
mean
6.89
sd
2.89

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 427163051.33% 40761
chr1 4418341 1.77% 4074
chr2 3334262 1.38% 3110
chr3 2580426 1.30% 2474
chr4 2206228 1.16% 2057
chr5 2387997 1.32% 2203
chr6 2487613 1.46% 2315
chr7 2477021 1.55% 2276
chr8 2032970 1.40% 1907
chr9 1716698 1.24% 1672
chr10 1892949 1.41% 1748
chr11 1963469 1.45% 1956
chr12 2214226 1.66% 2026
chr13 817435 0.71% 839
chr14 1129803 1.06% 1208
chr15 1402854 1.38% 1338
chr16 1446368 1.60% 1396
chr17 1891707 2.27% 1856
chr18 995291 1.24% 932
chr19 1682716 2.87% 1689
chr20 1116148 1.73% 1102
chr21 481999 1.03% 464
chr22 716284 1.41% 752
chrX 1323500 0.85% 1367
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40761 215 7636 1047.97 888
global segment-length histogram

Files

Filename Size md5
ENCFF164BQU.bed.gz 1.0 MB 8490e30a530a4948b21492af4cd06a09
ENCFF164BQU.tabix.bed.gz 449.75 KB 1300122448ff719eb4a412356cc00e4b
ENCFF164BQU.tabix.bed.gz.tbi 221.66 KB 83ffbff7e14f0f35f98ca6d08ed8b2b1
genomic_resource.yaml 2.08 KB 2a4d9a9ce5a2eb807c6d2289e6bf1867
statistics/