Resource

Id Histone_ChIP-seq/ENCSR495HITcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR495HIT [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (71 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR495HIT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (71 years)
  • date_created: 2021-01-28T04:11:04.423590+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR495HIT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (71 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR495HIT float

Histone_ChIP-seq_ENCSR495HIT
Histone_ChIP-seq ENCSR495HIT [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (71 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR495HIT [1.74, 47.9]
n
125,036,029
mean
8.87
sd
5.96

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1250360293.89% 85056
chr1 12419185 4.99% 8184
chr2 9424852 3.89% 6717
chr3 7752685 3.91% 5446
chr4 5162821 2.71% 3681
chr5 6923962 3.81% 4802
chr6 6594708 3.86% 4499
chr7 5779275 3.63% 4247
chr8 5119224 3.53% 3631
chr9 6054376 4.37% 3951
chr10 6483698 4.85% 4207
chr11 7334195 5.43% 4732
chr12 6496383 4.87% 4529
chr13 2970975 2.60% 2066
chr14 4289974 4.01% 2856
chr15 4299082 4.22% 2935
chr16 4193463 4.64% 2900
chr17 6687292 8.03% 4208
chr18 2543184 3.16% 1813
chr19 4856713 8.29% 3124
chr20 3593933 5.58% 2365
chr21 1315217 2.82% 917
chr22 2904613 5.72% 1866
chrX 1796594 1.15% 1345
chrY 39625 0.07% 35
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85056 210 61884 1470.04 983
global segment-length histogram

Files

Filename Size md5
ENCFF676LJR.bed.gz 1.82 MB d61adb8778c3754d4a9f17e667062990
ENCFF676LJR.tabix.bed.gz 884.51 KB 8c1e4d59f0dfdc332d74c3f566db4db9
ENCFF676LJR.tabix.bed.gz.tbi 260.26 KB 1fd244662b90c3c09da3167b747a99e8
genomic_resource.yaml 1.56 KB d5db1c671ef4b2c50fe6039f45ac546d
statistics/