Resource

Id Histone_ChIP-seq/ENCSR491FDGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR491FDG [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR491FDG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue female adult (51 years)
  • date_created: 2019-01-28T12:19:52.945891+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR491FDG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR491FDG float

Histone_ChIP-seq_ENCSR491FDG
Histone_ChIP-seq ENCSR491FDG [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR491FDG [1.69, 6.32]
n
978,307
mean
3.53
sd
0.608

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 9783070.03% 1866
chr1 92521 0.04% 180
chr2 88964 0.04% 167
chr3 38562 0.02% 78
chr4 38482 0.02% 73
chr5 39735 0.02% 87
chr6 45273 0.03% 89
chr7 55493 0.03% 104
chr8 50353 0.03% 90
chr9 47208 0.03% 84
chr10 47080 0.04% 87
chr11 46021 0.03% 94
chr12 28339 0.02% 60
chr13 17327 0.02% 33
chr14 28273 0.03% 58
chr15 32940 0.03% 61
chr16 33103 0.04% 65
chr17 91931 0.11% 155
chr18 9918 0.01% 23
chr19 74279 0.13% 132
chr20 33568 0.05% 67
chr21 9822 0.02% 19
chr22 20337 0.04% 38
chrX 8778 0.01% 22
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1866 205 3658 524.28 445
global segment-length histogram

Files

Filename Size md5
ENCFF299YMQ.bed.gz 32.11 KB 742bfa472aad02b2721524d6ad7cd7c2
ENCFF299YMQ.tabix.bed.gz 18.08 KB 47031e571506864c718ed04cbf07d5a9
ENCFF299YMQ.tabix.bed.gz.tbi 19.97 KB c249d8f11ac00d2570d4735de45dd865
genomic_resource.yaml 2.22 KB 6f2a5706eea3ae4af50723bf96a777d8
statistics/