Resource

Id Histone_ChIP-seq/ENCSR490KKScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR490KKS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR490KKS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue male adult (69 years)
  • date_created: 2022-02-02T13:42:44.014324+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR490KKS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (69 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR490KKS float

Histone_ChIP-seq_ENCSR490KKS
Histone_ChIP-seq ENCSR490KKS [biosample_summary="Homo sapiens heart left ventricle tissue male adult (69 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR490KKS [1.43, 15.7]
n
86,954,378
mean
4.37
sd
1.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 869543782.70% 105048
chr1 6074805 2.44% 7425
chr2 7042876 2.91% 8793
chr3 5936458 2.99% 7556
chr4 6279915 3.30% 8218
chr5 6386944 3.52% 7843
chr6 5318037 3.11% 6822
chr7 5278518 3.31% 6434
chr8 4924955 3.39% 5878
chr9 3406738 2.46% 4203
chr10 3895097 2.91% 4724
chr11 4128992 3.06% 4990
chr12 4564746 3.43% 5233
chr13 2869701 2.51% 3888
chr14 2687877 2.51% 3493
chr15 2232434 2.19% 2608
chr16 2249933 2.49% 2577
chr17 1489288 1.79% 1723
chr18 2073712 2.58% 2621
chr19 5390642 9.20% 3384
chr20 1530086 2.37% 1966
chr21 1259572 2.70% 1653
chr22 869471 1.71% 1044
chrX 1007503 0.65% 1850
chrY 56078 0.10% 122
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 105048 200 59015 827.76 559
global segment-length histogram

Files

Filename Size md5
ENCFF040RST.bed.gz 2.03 MB 5844b1f6d315378b859f924cc98e1cc1
ENCFF040RST.tabix.bed.gz 1.02 MB 1cc758b21a703056a02cf9848298ca59
ENCFF040RST.tabix.bed.gz.tbi 379.79 KB 46142ec42a0d05b7b07b7fa137927f7f
genomic_resource.yaml 1.53 KB 76e447b3e942c8493cb52f0f349a870a
statistics/