Resource

Id Histone_ChIP-seq/ENCSR485FSTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR485FST [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR485FST
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000320/
  • biosample_summary: Homo sapiens duodenal mucosa tissue male adult (76 years)
  • date_created: 2015-09-15T19:51:49.030053+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR485FST
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (76 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR485FST float

Histone_ChIP-seq_ENCSR485FST
Histone_ChIP-seq ENCSR485FST [biosample_summary="Homo sapiens duodenal mucosa tissue male adult (76 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR485FST [1.17, 43.1]
n
33,117,324
mean
9.71
sd
5.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 331173241.03% 41145
chr1 3621163 1.45% 4511
chr2 2171634 0.90% 2681
chr3 1764411 0.89% 2105
chr4 1136272 0.60% 1352
chr5 1518533 0.84% 1756
chr6 1920798 1.12% 2278
chr7 1444208 0.91% 1871
chr8 1143834 0.79% 1436
chr9 1439753 1.04% 1781
chr10 1397039 1.04% 1810
chr11 1951341 1.44% 2374
chr12 1725800 1.29% 2084
chr13 627274 0.55% 759
chr14 1193433 1.11% 1438
chr15 1087118 1.07% 1356
chr16 1384243 1.53% 1836
chr17 2228616 2.68% 2779
chr17_GL000205v2_random 1585 0.85% 1
chr18 516000 0.64% 671
chr19 2038793 3.48% 2602
chr20 917381 1.42% 1140
chr21 356220 0.76% 484
chr22 872517 1.72% 1126
chrM 1082 6.53% 2
chrUn_GL000219v1 2270 1.27% 4
chrUn_KI270442v1 607 0.15% 1
chrX 630494 0.40% 878
chrY 24905 0.04% 29
3338 contigs with no values (128303666 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41145 170 8813 804.89 616
global segment-length histogram

Files

Filename Size md5
ENCFF757LEN.bed.gz 921.48 KB ce21a4194044c6109f70b1d381e7d010
ENCFF757LEN.tabix.bed.gz 431.68 KB 3077d96d781c46bf0e9999c7cc469563
ENCFF757LEN.tabix.bed.gz.tbi 158.83 KB c40515b8bd654ee16f73992b5e6955e4
genomic_resource.yaml 1.51 KB c5de723b3d05ee11d9416964ff3986b1
statistics/