Histone_ChIP-seq_ENCSR479YCJ
Histone_ChIP-seq ENCSR479YCJ [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR479YCJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR479YCJ [biosamplesummary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (110 days) output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN948XTM|/analyses/ENCAN948XTM/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF460VGW|/files/ENCFF460VGW/} processed by ChIP-seq ENCODE3 hg19 pipeline has 19145518 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR479YCJ | float |
Histone_ChIP-seq_ENCSR479YCJ |
Histone_ChIP-seq ENCSR479YCJ [biosample_summary="Homo sapiens thymus tissue female embryo (110 days)" and target="H3K4me1"]
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[1.93, 47.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF994IZO.bed.gz | 2.59 MB | 3d35351b38d006fcf620e46cedc3e15e |
| ENCFF994IZO.bed.gz.dvc | 101.0 B | b6f341d7770bf4b46d9d6a9ea970bc15 |
| ENCFF994IZO.tabix.bed.gz | 1.21 MB | e7dbb1fc7513b9024012e004e99c91f3 |
| ENCFF994IZO.tabix.bed.gz.dvc | 107.0 B | 6b01069f4c8698d4a7892867be0bfb8a |
| ENCFF994IZO.tabix.bed.gz.tbi | 270.75 KB | 9082b96230467048b4a8a575a1e530fc |
| ENCFF994IZO.tabix.bed.gz.tbi.dvc | 110.0 B | c8eca0b0f99326299eb0a304afa66c0a |
| genomic_resource.yaml | 1.98 KB | f446502b335583fbf064d9994d6eb99b |
| genomic_resource_original.yaml | 1.84 KB | 4886c2991fbac7bc9f0d429d1c76ad82 |
| statistics/ |