Resource

Id Histone_ChIP-seq/ENCSR478UIRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR478UIR [biosample_summary="Homo sapiens placenta tissue male embryo (16 weeks)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR478UIR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue male embryo (16 weeks)
  • date_created: 2017-03-22T16:16:58.336535+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR478UIR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR478UIR float

Histone_ChIP-seq_ENCSR478UIR
Histone_ChIP-seq ENCSR478UIR [biosample_summary="Homo sapiens placenta tissue male embryo (16 weeks)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR478UIR [2.03, 28]
n
6,767,561
mean
4.28
sd
1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 67675610.21% 16849
chr1 235227 0.09% 619
chr2 388474 0.16% 1027
chr3 299614 0.15% 816
chr4 398071 0.21% 1045
chr5 448866 0.25% 1108
chr6 212247 0.12% 579
chr7 545275 0.34% 1296
chr8 441369 0.30% 1118
chr9 224554 0.16% 555
chr10 296993 0.22% 775
chr11 289718 0.21% 735
chr12 340052 0.26% 813
chr13 279380 0.24% 752
chr14 197623 0.18% 527
chr15 198718 0.19% 449
chr16 316223 0.35% 761
chr17 151916 0.18% 357
chr18 198810 0.25% 554
chr19 624732 1.07% 1248
chr20 135699 0.21% 362
chr21 241355 0.52% 591
chr22 148532 0.29% 341
chrX 151797 0.10% 415
chrY 2316 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16849 150 4779 401.66 343
global segment-length histogram

Files

Filename Size md5
ENCFF715CON.bed.gz 301.91 KB d453d84690f181729633f821be18f6cc
ENCFF715CON.tabix.bed.gz 162.3 KB ce7afd8b623bce53ae09cc99d0cdefb7
ENCFF715CON.tabix.bed.gz.tbi 104.79 KB 1a025abcf27b5ca61dbbc41c0529dcbf
genomic_resource.yaml 1.5 KB ec2228ec0dcefbd4626df5f3dfb6ecd1
statistics/