Resource

Id Histone_ChIP-seq/ENCSR473AQIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR473AQI [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K23ac"]
Description
Labels
  • accession: ENCSR473AQI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/in_vitro_differentiated_cells_NTR_0000856/
  • biosample_summary: Homo sapiens mesendoderm originated from H1
  • date_created: 2015-10-01T07:16:34.898249+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR473AQI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K23ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR473AQI float

Histone_ChIP-seq_ENCSR473AQI
Histone_ChIP-seq ENCSR473AQI [biosample_summary="Homo sapiens mesendoderm originated from H1" and target="H3K23ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR473AQI [1.84, 11.1]
n
7,639,983
mean
4.52
sd
1.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 76399830.24% 27687
chr1 789982 0.32% 2824
chr2 561732 0.23% 2097
chr3 444913 0.22% 1667
chr4 290950 0.15% 1063
chr5 390413 0.22% 1460
chr6 405315 0.24% 1502
chr7 361071 0.23% 1316
chr8 308127 0.21% 1149
chr9 333676 0.24% 1222
chr10 387837 0.29% 1428
chr11 440978 0.33% 1597
chr12 382640 0.29% 1364
chr13 168003 0.15% 630
chr14 252371 0.24% 928
chr15 264807 0.26% 937
chr16 313122 0.35% 1111
chr17 461163 0.55% 1600
chr18 177525 0.22% 672
chr19 330248 0.56% 1078
chr20 230883 0.36% 842
chr21 84488 0.18% 311
chr22 227498 0.45% 769
chrX 31144 0.02% 116
chrY 1097 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27687 120 2043 275.94 240
global segment-length histogram

Files

Filename Size md5
ENCFF360AOO.bed.gz 505.53 KB 5cb8e45bbdb1b2136c09a44952108fb8
ENCFF360AOO.tabix.bed.gz 264.76 KB 62bfe20490f2210a7990267d68ef2213
ENCFF360AOO.tabix.bed.gz.tbi 166.91 KB c73ecae09a0e416d7bf05030b3ea142b
genomic_resource.yaml 1.68 KB 172e7064a13a5a803e80017cca51138c
statistics/