Resource

Id Histone_ChIP-seq/ENCSR462XREcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR462XRE [biosample_summary="Homo sapiens H1" and target="H2BK20ac"]
Description
Labels
  • accession: ENCSR462XRE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:53.951029+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR462XRE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK20ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR462XRE float

Histone_ChIP-seq_ENCSR462XRE
Histone_ChIP-seq ENCSR462XRE [biosample_summary="Homo sapiens H1" and target="H2BK20ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR462XRE [1.7, 16.7]
n
26,418,162
mean
4.56
sd
1.38

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 264181620.82% 87029
chr1 2777792 1.12% 8923
chr2 2061956 0.85% 6814
chr3 1594958 0.80% 5417
chr4 1102960 0.58% 3829
chr5 1469217 0.81% 4891
chr6 1612433 0.94% 5296
chr7 1365620 0.86% 4526
chr8 1161490 0.80% 3878
chr9 1101800 0.80% 3624
chr10 1397919 1.04% 4565
chr11 1430916 1.06% 4610
chr12 1273246 0.96% 4228
chr13 631801 0.55% 2175
chr14 820712 0.77% 2735
chr15 908284 0.89% 2872
chr16 967523 1.07% 3163
chr17 1269443 1.52% 4073
chr18 622665 0.77% 2124
chr19 701018 1.20% 2341
chr20 826621 1.28% 2660
chr21 322137 0.69% 1061
chr22 650232 1.28% 2001
chrX 328171 0.21% 1157
chrY 19248 0.03% 66
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87029 110 4383 303.56 249
global segment-length histogram

Files

Filename Size md5
ENCFF215EPH.bed.gz 1.67 MB bd3c1fc6d174ea83407c05633a6aff1c
ENCFF215EPH.tabix.bed.gz 839.94 KB c349700229a6e1c9d6894ecc5bc4e4cd
ENCFF215EPH.tabix.bed.gz.tbi 272.37 KB 4b5f90b8be149093026a68755b5d2bdf
genomic_resource.yaml 1.58 KB e7db2334592056d78959b51bd273efdf
statistics/