Resource

Id Histone_ChIP-seq/ENCSR453MSIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR453MSI [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR453MSI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0011907/
  • biosample_summary: Homo sapiens gastrocnemius medialis tissue female adult (51 years)
  • date_created: 2017-12-06T21:10:32.470953+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR453MSI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR453MSI float

Histone_ChIP-seq_ENCSR453MSI
Histone_ChIP-seq ENCSR453MSI [biosample_summary="Homo sapiens gastrocnemius medialis tissue female adult (51 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR453MSI [1.18, 7.56]
n
16,184,659
mean
3.42
sd
0.926

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 161846590.50% 24932
chr1 1496734 0.60% 2437
chr2 978619 0.40% 1304
chr3 487600 0.25% 721
chr4 649664 0.34% 900
chr5 828770 0.46% 1179
chr6 1002134 0.59% 1342
chr7 851849 0.53% 1195
chr8 637756 0.44% 1033
chr9 753639 0.54% 1210
chr10 767403 0.57% 1140
chr11 764140 0.57% 1249
chr12 710597 0.53% 1115
chr13 345178 0.30% 488
chr14 448241 0.42% 639
chr15 472190 0.46% 639
chr16 681792 0.75% 1070
chr17 1133726 1.36% 1690
chr18 274194 0.34% 434
chr19 1208048 2.06% 1780
chr20 652053 1.01% 1050
chr21 211624 0.45% 433
chr22 456861 0.90% 904
chrM 7188 43.38% 11
chrX 363702 0.23% 965
chrY 957 <0.01% 4
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24932 125 24353 649.15 407
global segment-length histogram

Files

Filename Size md5
ENCFF379PVI.bed.gz 473.32 KB 2cd841fbdbbffb56b1adbbb1d441b1d7
ENCFF379PVI.tabix.bed.gz 243.59 KB e306f0a2153d7bf573323ccda10ebe60
ENCFF379PVI.tabix.bed.gz.tbi 89.67 KB 642646531a6156381fa6cd51dfa26e7f
genomic_resource.yaml 1.55 KB c7725982a11ba97f0b0ab330bb1e83f3
statistics/