Resource

Id Histone_ChIP-seq/ENCSR451EKUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR451EKU [biosample_summary="Homo sapiens placenta tissue embryo (16 weeks)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR451EKU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue embryo (16 weeks)
  • date_created: 2017-03-22T16:16:58.628330+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR451EKU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR451EKU float

Histone_ChIP-seq_ENCSR451EKU
Histone_ChIP-seq ENCSR451EKU [biosample_summary="Homo sapiens placenta tissue embryo (16 weeks)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR451EKU [1.91, 11.8]
n
9,233,695
mean
4.01
sd
0.879

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 92336950.29% 21402
chr1 298564 0.12% 683
chr2 512314 0.21% 1299
chr3 419219 0.21% 1077
chr4 525842 0.28% 1313
chr5 520816 0.29% 1256
chr6 321959 0.19% 821
chr7 589141 0.37% 1326
chr8 694050 0.48% 1626
chr9 265750 0.19% 682
chr10 358436 0.27% 900
chr11 438110 0.32% 1042
chr12 504774 0.38% 1107
chr13 567036 0.50% 1502
chr14 392825 0.37% 1009
chr15 243974 0.24% 534
chr16 331690 0.37% 751
chr17 182354 0.22% 426
chr18 282824 0.35% 708
chr19 892154 1.52% 1446
chr20 153750 0.24% 373
chr21 559708 1.20% 1119
chr22 140657 0.28% 289
chrX 29499 0.02% 96
chrY 8249 0.01% 17
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 21402 195 8453 431.44 363
global segment-length histogram

Files

Filename Size md5
ENCFF525PGE.bed.gz 365.13 KB ef8dbe610159a5c578e8bf9e2f4928c7
ENCFF525PGE.tabix.bed.gz 195.82 KB 44cffe2514f05618c6682f824f9728b4
ENCFF525PGE.tabix.bed.gz.tbi 117.89 KB b08ea0a7112e7d49bc942d2a749dd2ac
genomic_resource.yaml 1.47 KB dc4efceb5f507ee7279445e4a07682c8
statistics/