Resource

Id Histone_ChIP-seq/ENCSR449FRQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR449FRQ [biosample_summary="Homo sapiens heart left ventricle tissue female adult (51 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR449FRQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (51 years)
  • date_created: 2018-05-11T18:46:35.701706+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR449FRQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR449FRQ float

Histone_ChIP-seq_ENCSR449FRQ
Histone_ChIP-seq ENCSR449FRQ [biosample_summary="Homo sapiens heart left ventricle tissue female adult (51 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR449FRQ [1.61, 14.6]
n
180,271,312
mean
4.63
sd
1.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1802713125.60% 147367
chr1 18235560 7.32% 14495
chr2 14525718 6.00% 12036
chr3 13106634 6.61% 10855
chr4 7442217 3.91% 6752
chr5 10112291 5.57% 8609
chr6 9998939 5.85% 8725
chr7 8632117 5.42% 7559
chr8 7978280 5.50% 6835
chr9 7735408 5.59% 5998
chr10 9826658 7.34% 7691
chr11 9635629 7.13% 7493
chr12 8897371 6.68% 7176
chr13 4346588 3.80% 3800
chr14 5847505 5.46% 4550
chr15 6736658 6.61% 5335
chr16 6019669 6.66% 4775
chr17 8609932 10.34% 6292
chr18 3764449 4.68% 3397
chr19 6059364 10.34% 4580
chr20 5017118 7.79% 3926
chr21 1730387 3.70% 1494
chr22 4554472 8.96% 3287
chrX 1458348 0.93% 1707
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 147367 230 40764 1223.28 871
global segment-length histogram

Files

Filename Size md5
ENCFF106OKI.bed.gz 3.13 MB 6aa1e4b2dceb616e358b2b105a47b887
ENCFF106OKI.tabix.bed.gz 1.5 MB 03c7e2c19f5d79fa9b44b52ba1a29b7a
ENCFF106OKI.tabix.bed.gz.tbi 321.66 KB ae88109a47f6f907935dfb9c1abb7531
genomic_resource.yaml 1.75 KB 543946187346145319c10769827c51ed
statistics/