Resource

Id Histone_ChIP-seq/ENCSR448MMLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR448MML [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR448MML
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:31.962848+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR448MML
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR448MML float

Histone_ChIP-seq_ENCSR448MML
Histone_ChIP-seq ENCSR448MML [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (75 years)" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR448MML [1.81, 38.6]
n
47,528,233
mean
9.07
sd
5.19

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 475282331.48% 65519
chr1 5048814 2.03% 6820
chr1_KI270713v1_random 277 0.68% 1
chr2 3174119 1.31% 4405
chr3 2719261 1.37% 3654
chr4 1534055 0.81% 2071
chr5 2195889 1.21% 2956
chr6 2296176 1.34% 3077
chr7 1932237 1.21% 2808
chr8 1746375 1.20% 2442
chr9 2224626 1.61% 3083
chr10 2210367 1.65% 3096
chr11 3053245 2.26% 4132
chr12 2427162 1.82% 3295
chr13 856071 0.75% 1175
chr14 1622372 1.52% 2184
chr15 1511003 1.48% 2154
chr16 1955151 2.16% 2798
chr17 3167400 3.80% 4382
chr18 741274 0.92% 1086
chr19 2914401 4.97% 3926
chr20 1451458 2.25% 2070
chr21 422233 0.90% 611
chr22 1525679 3.00% 2100
chrUn_GL000219v1 840 0.47% 2
chrX 797748 0.51% 1191
3341 contigs with no values (186084557 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65519 170 9260 725.41 546
global segment-length histogram

Files

Filename Size md5
ENCFF335SAT.bed.gz 1.32 MB 6d9b2134dc78af188fa684bb67330f55
ENCFF335SAT.tabix.bed.gz 657.52 KB 0734c2f2b889224a547c97e075aa49f8
ENCFF335SAT.tabix.bed.gz.tbi 213.83 KB 095873f963b0244f519cc0e57a09c7ca
genomic_resource.yaml 1.57 KB 73565bc50b429203f67aa8febdc1f3fe
statistics/