Resource

Id Histone_ChIP-seq/ENCSR444YIPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR444YIP [biosample_summary="Homo sapiens BE2C" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR444YIP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005725/
  • biosample_summary: Homo sapiens BE2C
  • date_created: 2020-08-12T01:24:47.021579+00:00
  • date_released: 2020-08-28
  • doi: 10.17989/ENCSR444YIP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR444YIP float

Histone_ChIP-seq_ENCSR444YIP

Histone_ChIP-seq ENCSR444YIP [biosample_summary="Homo sapiens BE2C" and target="H3K9me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR444YIP [1.05, 6.04]
n
2,983,368
mean
2.44
sd
0.436

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 29833680.09% 7783
chr1 146875 0.06% 389
chr2 237070 0.10% 530
chr3 148940 0.08% 392
chr4 160406 0.08% 455
chr5 232511 0.13% 641
chr6 121878 0.07% 363
chr7 213670 0.13% 559
chr8 189857 0.13% 513
chr9 124220 0.09% 338
chr10 41457 0.03% 115
chr11 103049 0.08% 277
chr12 185146 0.14% 484
chr13 103026 0.09% 284
chr14 116774 0.11% 298
chr15 93532 0.09% 247
chr16 135564 0.15% 353
chr17 65892 0.08% 175
chr18 650 <0.01% 2
chr19 312257 0.53% 694
chr20 74995 0.12% 201
chr21 83241 0.18% 223
chr22 91795 0.18% 249
chrX 563 <0.01% 1
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7783 195 5406 383.32 323
global segment-length histogram

Files

Filename Size md5
ENCFF817KMI.bed.gz 161.66 KB a58586bf48a6c68353ee34fe0b1097fc
ENCFF817KMI.tabix.bed.gz 82.79 KB 608059db89861b7eec57aa2498da027b
ENCFF817KMI.tabix.bed.gz.tbi 64.55 KB af33bc96a8d99c9533e54720b46394c1
genomic_resource.yaml 1.36 KB 0a7bf95957d6f50d4459d6fa7d14d936
statistics/