Resource

Id Histone_ChIP-seq/ENCSR444TMCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR444TMC [biosample_summary="Homo sapiens IMR-90" and target="H4K8ac"]
Description
Labels
  • accession: ENCSR444TMC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0001196/
  • biosample_summary: Homo sapiens IMR-90
  • date_created: 2015-10-01T07:16:17.526489+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR444TMC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H4K8ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR444TMC float

Histone_ChIP-seq_ENCSR444TMC
Histone_ChIP-seq ENCSR444TMC [biosample_summary="Homo sapiens IMR-90" and target="H4K8ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR444TMC [1.7, 50.1]
n
81,056,721
mean
8.39
sd
4.81

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 810567212.52% 169089
chr1 7306813 2.93% 14988
chr2 7223438 2.98% 14926
chr3 5186931 2.62% 10997
chr4 3599312 1.89% 8444
chr5 4816771 2.65% 10194
chr6 4644251 2.72% 10331
chr7 3944468 2.48% 8596
chr8 3833056 2.64% 8440
chr9 3595620 2.60% 7277
chr10 3688537 2.76% 7812
chr11 4671365 3.46% 9190
chr12 4156856 3.12% 8735
chr13 2101596 1.84% 4771
chr14 2541305 2.37% 5204
chr15 3229433 3.17% 6398
chr16 2602425 2.88% 4919
chr17 3810023 4.58% 7102
chr18 1693113 2.11% 3754
chr19 2608315 4.45% 5017
chr20 2045753 3.17% 4070
chr21 1026477 2.20% 2212
chr22 1525587 3.00% 2831
chrX 1205276 0.77% 2881
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 169089 118 8260 479.37 352
global segment-length histogram

Files

Filename Size md5
ENCFF339CWM.bed.gz 4.09 MB c0b44d9cdbcfd24126c8a050dcac18af
ENCFF339CWM.tabix.bed.gz 1.73 MB 7af5634ac9443531de7d5f1d2e2d2642
ENCFF339CWM.tabix.bed.gz.tbi 317.53 KB 6211faa0b2b8c925aec4b412c282019d
genomic_resource.yaml 2.09 KB 6d34e262e3d596c437ee0b2f4235e3b8
statistics/