Resource

Id Histone_ChIP-seq/ENCSR441YQAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR441YQA [biosample_summary="Homo sapiens ascending aorta tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR441YQA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001496/
  • biosample_summary: Homo sapiens ascending aorta tissue female adult (51 years)
  • date_created: 2016-10-22T16:09:53.917158+00:00
  • date_released: 2016-11-05
  • doi: 10.17989/ENCSR441YQA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR441YQA float

Histone_ChIP-seq_ENCSR441YQA
Histone_ChIP-seq ENCSR441YQA [biosample_summary="Homo sapiens ascending aorta tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR441YQA [1.45, 10.2]
n
7,742,157
mean
4.46
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 77421570.24% 23768
chr1 343707 0.14% 1285
chr1_KI270709v1_random 2034 3.04% 6
chr1_KI270712v1_random 364 0.21% 1
chr2 353079 0.15% 1369
chr2_KI270716v1_random 472 0.31% 3
chr3 314922 0.16% 1225
chr4 383781 0.20% 1269
chr4_GL000008v2_random 3748 1.79% 3
chr5 546650 0.30% 1638
chr5_GL000208v1_random 552 0.60% 3
chr6 230305 0.13% 951
chr7 393822 0.25% 1352
chr8 226250 0.16% 858
chr9 269345 0.19% 809
chr9_KI270719v1_random 1342 0.76% 3
chr10 318364 0.24% 1104
chr11 238047 0.18% 932
chr12 370456 0.28% 1093
chr13 116446 0.10% 484
chr14 125093 0.12% 507
chr14_GL000194v1_random 575 0.30% 4
chr14_GL000225v1_random 2123 1.01% 9
chr15 177915 0.17% 557
chr16 208545 0.23% 618
chr17 98415 0.12% 348
chr17_KI270729v1_random 13673 4.87% 39
chr17_KI270730v1_random 3155 2.80% 15
chr18 94452 0.12% 365
chr19 2236398 3.82% 4331
chr20 93096 0.14% 337
chr21 114459 0.25% 371
chr22 59039 0.12% 221
chr22_KI270732v1_random 1142 2.75% 4
chr22_KI270733v1_random 3392 1.89% 15
chr22_KI270735v1_random 2364 5.52% 9
chr22_KI270736v1_random 12004 6.60% 34
chr22_KI270738v1_random 1994 2.01% 9
chrUn_GL000214v1 116 0.08% 1
chrUn_GL000216v2 512 0.29% 3
chrUn_GL000218v1 234 0.15% 2
chrUn_GL000219v1 1232 0.69% 6
chrUn_GL000220v1 112 0.07% 1
chrUn_GL000224v1 3678 2.05% 10
chrUn_KI270337v1 110 9.81% 1
chrUn_KI270429v1 470 34.53% 1
chrUn_KI270435v1 931 1.00% 3
chrUn_KI270438v1 6559 5.83% 24
chrUn_KI270442v1 17617 4.49% 55
chrUn_KI270466v1 417 33.82% 2
chrUn_KI270467v1 1310 33.42% 2
chrUn_KI270468v1 350 8.63% 1
chrUn_KI270507v1 148 2.76% 1
chrUn_KI270508v1 118 6.05% 1
chrUn_KI270512v1 147 0.65% 1
chrUn_KI270515v1 127 2.00% 1
chrUn_KI270519v1 1506 1.09% 6
chrUn_KI270521v1 100 1.31% 1
chrUn_KI270538v1 335 0.37% 2
chrUn_KI270589v1 866 1.95% 3
chrUn_KI270590v1 320 6.83% 1
chrUn_KI270591v1 877 15.13% 1
chrUn_KI270744v1 392 0.23% 2
chrUn_KI270746v1 171 0.26% 1
chrUn_KI270747v1 212 0.11% 1
chrUn_KI270749v1 608 0.38% 2
chrUn_KI270751v1 771 0.51% 1
chrUn_KI270756v1 786 0.99% 3
chrUn_KI270757v1 2058 2.89% 7
chrX 331953 0.21% 1423
chrY 5494 0.01% 17
3296 contigs with no values (124031861 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23768 100 10182 325.74 229
global segment-length histogram

Files

Filename Size md5
ENCFF834IVO.bed.gz 416.44 KB 7870690394dcb22b22c15bda507ed358
ENCFF834IVO.tabix.bed.gz 219.02 KB 91a7cf21c10abde664c8f9a3a424e81f
ENCFF834IVO.tabix.bed.gz.tbi 114.63 KB 20cd5b174db2a2c497be2cce05f5149c
genomic_resource.yaml 1.52 KB 3247c1c63dc814f44d556410494d1169
statistics/