Resource

Id Histone_ChIP-seq/ENCSR439BIBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR439BIB [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR439BIB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002170/
  • biosample_summary: Homo sapiens upper lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:54:28.123718+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR439BIB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR439BIB float

Histone_ChIP-seq_ENCSR439BIB
Histone_ChIP-seq ENCSR439BIB [biosample_summary="Homo sapiens upper lobe of right lung tissue male adult (60 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR439BIB [1.38, 8.98]
n
14,179,913
mean
3.66
sd
0.979

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 141799130.44% 16257
chr1 863931 0.35% 1099
chr2 849318 0.35% 1113
chr3 730724 0.37% 999
chr4 791858 0.42% 939
chr5 929647 0.51% 1153
chr6 580655 0.34% 822
chr7 823214 0.52% 1004
chr8 724620 0.50% 893
chr9 512398 0.37% 577
chr10 588119 0.44% 706
chr11 589388 0.44% 748
chr12 843734 0.63% 917
chr13 308107 0.27% 471
chr14 330887 0.31% 445
chr15 395472 0.39% 452
chr16 480157 0.53% 513
chr17 257286 0.31% 312
chr18 264495 0.33% 349
chr19 2747618 4.69% 1940
chr20 201331 0.31% 291
chr21 178562 0.38% 242
chr22 141832 0.28% 192
chrX 40043 0.03% 69
chrY 6517 0.01% 11
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16257 220 30770 872.23 649
global segment-length histogram

Files

Filename Size md5
ENCFF699RLH.bed.gz 325.21 KB a570dc3ccda6de21bc4c37eddb4dffe2
ENCFF699RLH.tabix.bed.gz 167.64 KB 36c125a7d4c1a03cad84567f608d7535
ENCFF699RLH.tabix.bed.gz.tbi 101.09 KB c80f1d2c14b1140fdc85e07ab85bd095
genomic_resource.yaml 1.54 KB 873a18016c6e0c51133648c9cb8aeddb
statistics/