Resource

Id Histone_ChIP-seq/ENCSR437MHWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR437MHW [biosample_summary="Homo sapiens neutrophil male" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR437MHW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000775/
  • biosample_summary: Homo sapiens neutrophil male
  • date_created: 2015-09-15T19:48:47.686588+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR437MHW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR437MHW float

Histone_ChIP-seq_ENCSR437MHW
Histone_ChIP-seq ENCSR437MHW [biosample_summary="Homo sapiens neutrophil male" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR437MHW [1.86, 26.2]
n
39,463,185
mean
6.06
sd
2.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 394631851.23% 59251
chr1 2293247 0.92% 3503
chr1_KI270709v1_random 2289 3.42% 2
chr1_KI270712v1_random 694 0.39% 1
chr1_KI270713v1_random 533 1.31% 1
chr2 2557432 1.06% 4124
chr2_KI270716v1_random 3588 2.33% 5
chr3 2096406 1.06% 3522
chr4 2187332 1.15% 3669
chr4_GL000008v2_random 4414 2.10% 1
chr5 2627798 1.45% 4077
chr5_GL000208v1_random 696 0.75% 2
chr6 1970042 1.15% 3279
chr7 2767439 1.74% 4338
chr8 2002819 1.38% 2953
chr9 1172233 0.85% 1823
chr9_KI270720v1_random 639 1.64% 1
chr10 1743818 1.30% 2599
chr11 1201551 0.89% 1985
chr12 1884312 1.41% 2706
chr13 1241344 1.09% 2169
chr14 949535 0.89% 1571
chr14_GL000194v1_random 504 0.26% 1
chr14_GL000225v1_random 77519 36.71% 77
chr14_KI270722v1_random 7052 3.63% 11
chr14_KI270723v1_random 1097 2.88% 2
chr15 891313 0.87% 1345
chr16 959035 1.06% 1375
chr17 826996 0.99% 1081
chr17_GL000205v2_random 44687 24.08% 25
chr17_KI270729v1_random 53463 19.04% 46
chr17_KI270730v1_random 16101 14.31% 17
chr18 864507 1.08% 1404
chr19 5589585 9.54% 6047
chr20 645742 1.00% 882
chr21 608541 1.30% 872
chr22 309600 0.61% 462
chr22_KI270732v1_random 669 1.61% 2
chr22_KI270733v1_random 5978 3.33% 13
chr22_KI270735v1_random 2894 6.76% 5
chr22_KI270736v1_random 109969 60.45% 60
chr22_KI270738v1_random 7753 7.80% 16
chrUn_GL000214v1 367 0.27% 1
chrUn_GL000216v2 25388 14.38% 17
chrUn_GL000219v1 6683 3.73% 7
chrUn_GL000224v1 3120 1.74% 5
chrUn_KI270429v1 781 57.38% 1
chrUn_KI270435v1 601 0.65% 1
chrUn_KI270438v1 13494 11.99% 19
chrUn_KI270442v1 74376 18.97% 54
chrUn_KI270448v1 336 4.20% 1
chrUn_KI270468v1 538 13.27% 1
chrUn_KI270512v1 1121 4.94% 2
chrUn_KI270515v1 263 4.13% 1
chrUn_KI270517v1 416 12.79% 1
chrUn_KI270519v1 3682 2.67% 6
chrUn_KI270522v1 408 7.19% 1
chrUn_KI270538v1 4198 4.60% 8
chrUn_KI270589v1 2810 6.32% 1
chrUn_KI270591v1 918 15.84% 1
chrUn_KI270741v1 196 0.12% 1
chrUn_KI270744v1 2335 1.39% 3
chrUn_KI270751v1 1108 0.74% 1
chrUn_KI270754v1 345 0.86% 1
chrUn_KI270756v1 7019 8.82% 6
chrUn_KI270757v1 3476 4.88% 5
chrX 1555158 1.00% 3008
chrY 22882 0.04% 24
3299 contigs with no values (124269447 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 59251 195 20954 666.03 490
global segment-length histogram

Files

Filename Size md5
ENCFF523QCG.bed.gz 1.07 MB 977b18333bdc792650ef352ea1cb8693
ENCFF523QCG.tabix.bed.gz 567.16 KB 620f330662a66651538168b030a87742
ENCFF523QCG.tabix.bed.gz.tbi 249.8 KB 6c7eb4d9e3ebf7c8efbfec5fc196af8b
genomic_resource.yaml 1.87 KB 06804496223bab3b92c7f4f963529127
statistics/