Resource
| Id | Histone_ChIP-seq/ENCSR433GMU |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR433GMU [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"] |
| Description |
status: released biological_replicates: Rep 1 summary: 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1 output_type: peaks audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-joint-replicate-peak-calling-step-v-1|/analysis-steps/crg-chip-seq-joint-replicate-peak-calling-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-alignment-and-filtering-step-v-1|/analysis-steps/crg-chip-seq-alignment-and-filtering-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-bed-to-bigbed-conversion-step-v-1|/analysis-steps/crg-chip-seq-bed-to-bigbed-conversion-step-v-1/} audit_internal_action: Released pipeline {ENCPL436CSM|/pipelines/ENCPL436CSM/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} audit_internal_action: Released analysis step version {crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0|/analysis-step-versions/crg-chip-seq-peak-calling-and-signal-generation-step-v-1-0/} has in progress subobject analysis step {crg-chip-seq-peak-calling-and-signal-generation-step-v-1|/analysis-steps/crg-chip-seq-peak-calling-and-signal-generation-step-v-1/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR433GMU | float |
Histone_ChIP-seq_ENCSR433GMU |
Histone_ChIP-seq ENCSR433GMU [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
|
 |
[1.26, 16.3] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 228162585 | 7.09% | 224476 |
| chr1 | 22226822 | 8.93% | 20892 |
| chr1_KI270711v1_random | 5106 | 12.10% | 4 |
| chr2 | 18783881 | 7.76% | 18914 |
| chr3 | 14469739 | 7.30% | 14597 |
| chr4 | 9761683 | 5.13% | 10830 |
| chr5 | 12766222 | 7.03% | 12748 |
| chr6 | 9891342 | 5.79% | 11216 |
| chr7 | 11627632 | 7.30% | 12397 |
| chr8 | 11687087 | 8.05% | 9834 |
| chr9 | 9440975 | 6.82% | 9629 |
| chr10 | 10828265 | 8.09% | 10837 |
| chr11 | 10267994 | 7.60% | 9708 |
| chr12 | 11984840 | 8.99% | 11409 |
| chr13 | 5470155 | 4.78% | 5658 |
| chr14 | 7211117 | 6.74% | 7486 |
| chr14_GL000194v1_random | 1655 | 0.86% | 3 |
| chr15 | 8499373 | 8.33% | 8089 |
| chr16 | 8920504 | 9.87% | 8182 |
| chr17 | 11499251 | 13.81% | 10659 |
| chr17_GL000205v2_random | 2340 | 1.26% | 4 |
| chr18 | 4416220 | 5.49% | 4582 |
| chr19 | 11385903 | 19.42% | 8450 |
| chr20 | 5955030 | 9.24% | 5684 |
| chr21 | 2723363 | 5.83% | 2632 |
| chr22 | 4525920 | 8.91% | 4306 |
| chrUn_GL000195v1 | 6784 | 3.71% | 15 |
| chrUn_GL000219v1 | 27210 | 15.18% | 27 |
| chrUn_GL000224v1 | 258 | 0.14% | 1 |
| chrUn_KI270438v1 | 622 | 0.55% | 2 |
| chrUn_KI270741v1 | 391 | 0.25% | 1 |
| chrX | 3774901 | 2.42% | 5680 |
| 3335 contigs with no values (185073506 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 224476 | 250 | 38789 | 1016.42 | 520 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF084AWV.bed.gz | 4.27 MB | 5f144020b5332a37455593f19428f644 |
| ENCFF084AWV.tabix.bed.gz | 2.11 MB | 0c2c45a9f7cc9bd9213e27f62cea2b95 |
| ENCFF084AWV.tabix.bed.gz.tbi | 203.71 KB | 0eb25f16a82d876e40c076cda2cc715b |
| genomic_resource.yaml | 3.12 KB | 2f2a6e146032d657d759fd36fecd3d28 |
| statistics/ |