Histone_ChIP-seq_ENCSR433FJP
Histone_ChIP-seq ENCSR433FJP [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K18ac"]
×
| Id: | Histone_ChIP-seq/ENCSR433FJP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR433FJP [biosamplesummary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K18ac"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN007BIT|/analyses/ENCAN007BIT/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN007BIT|/analyses/ENCAN007BIT/} has in progress subobject document {f96f9802-55c1-495f-9cc7-03594779b870|/documents/f96f9802-55c1-495f-9cc7-03594779b870/} audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments file {ENCFF884MEA|/files/ENCFF884MEA/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline was generated from a library with PBC1 value of 0.90. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR433FJP | float |
Histone_ChIP-seq_ENCSR433FJP |
Histone_ChIP-seq ENCSR433FJP [biosample_summary="Homo sapiens mesenchymal stem cell originated from H1" and target="H3K18ac"]
|
|
[1.78, 23.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF460PEQ.bed.gz | 1.96 MB | 221cb2372c7ba510c6fd509df258ec65 |
| ENCFF460PEQ.bed.gz.dvc | 101.0 B | ca01340529cb52750cc5ee7d9f3d4bad |
| ENCFF460PEQ.tabix.bed.gz | 977.73 KB | 9839572175cbdb149411fb07e04e4387 |
| ENCFF460PEQ.tabix.bed.gz.dvc | 107.0 B | 4753d31a235a08203ca3e17c742edced |
| ENCFF460PEQ.tabix.bed.gz.tbi | 274.82 KB | 5343f06d01732c70477d57355bb5d11e |
| ENCFF460PEQ.tabix.bed.gz.tbi.dvc | 110.0 B | dcb0a5853e77ee33d459a0354af58606 |
| genomic_resource.yaml | 2.36 KB | 6c426d3c319aa73adb29edcc1410c7b0 |
| genomic_resource_original.yaml | 2.22 KB | 1a57a4ff87c6bc319a0f05cac8334a48 |
| statistics/ |